Gene
| Gene Model ID | pfu_aug2.0_552.1_07661 |
|---|---|
| Locus | scaffold552.1 : 27146 ... 38154 : + |
| To GenomeBrowser | scaffold552.1:27146..38154 |
| Genes list of scaffold | scaffold552.1 |
| Synonym | pfu_aug1.0_3453.1_30412 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_552.1_07661.t1 | 3 | 1 | zf-B_box | 13 | 44 | 2.4e-06 | 27.2 | 3.3e-10 | 2.4e-06 | 27.2 |
| pfu_aug2.0_552.1_07661.t1 | 3 | 2 | zf-B_box | 250 | 257 | 2.4e-06 | 27.2 | 1.4 | 10000.0 | -3.5 |
| pfu_aug2.0_552.1_07661.t1 | 3 | 3 | zf-B_box | 336 | 352 | 2.4e-06 | 27.2 | 2.0 | 15000.0 | -5.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_552.1_07661.t1 | gi|512856533|ref|XP_004916525.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_552.1_07661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07661.t1 atggcagcggaattcgctgcccatgccgcccttattacatgtcccgaccatccagatgaaaagctggacagcttttgtac agtctgtgacatacgtgtttgtgagggatgtcgcggtgaccataaagaccatatatggatgcgagtaaataagctggcga ggttcgtgagacagaatgctgaaacaagatgtcaggatatcactcaaatgaaacatgacctaaagaagaatgaggaagcg gaacaaaatcagatagaagacatcagaaggatacagcgaggacgggtagcaatggtgaatgattatgccgagacgctgat ttctgaagttaaacaaagaggggaatatactaacatgtctgcggagttcaagaagctagatttaatgcatgacttctttc agaatcaacttgatacagccgatgacaatgttataatggaaatggaagaagagtttcatatcaagaaaaagagaatatct ttacctattcaggaggtgagatttgtagagggcactaccgcatctgacgtcttctgtcagatgtttggcaagaaggattc agtgtcagctctcaaggacaaaattcaagcactggaaaaggaacgtgacatgcacaaacaatgctgtgaggcatttatta aaaactcaaacaaggaagttatcgaattcgagaaaaggaatcaagaacttaagcaaattctagcaacggagatggcacag agagaaaagttcaaactgttacatgagaaggaccaacaacttatttgtgacctttacgatgaaatcgatgagcttatgca atgttatatgccatatcacccgatgcaacatgtacagcaacagaggacaattccgttccaacagccgaacgccccgtccc aacatgttccgttgccttacgaaaacgctcaacacaaacgaggacgacgccgatcaagccgtggaacgtgcatgagtgta gcgatatatggtacagaggaccttcatagtgaggttaggcaagagatatgcgattacatgtcacaccacagagagaaatt cgagtgtttcacagactgttcaatagaccaacatatcaggaatcaaaggaaaatggatggtagcataaattcatgggcaa cggaagccgatatatacgcagctgctgcaaggtatgaaaccaatattaaaataacaatgaataaggataaaccagaatgg cataaccatgtacttcgtataaacgacgacggaacagaggaaacaattaaaccttctaaacattctattcatttgttact gagcaacaatcatgtcactgtgttatatgtccatcaagtcgatgcaattccaacgctcaatgatcctgctctggcatgct caacaactcaaaatgaaacagttgattggtttgaaatgacaccgagtagtgcacaaagtttaacagagggtgcaaaaccg gaagcggaagttgatcgaaaaccggaagtgttgaaagttgttcacgatcctgctgaatccgattcttatgaggtggttgg tgaaacaatagatcttgcgggcgaaaatgaaagtaaaagtgataggattaaaccgcaaaaatcaatgtctggcagagaac acggtaagaaacggtttaaattgaaggataaaggtgacaaaagtatgggaggagacacaggagtcaaagcagagtttgac cacatgaattctaaccaggatgttgttacaaatttgtcaaagtacaagttaacgagggaagaaatatctctgttgagtaa aggaataaagttcattcctgacaaaaccaaagtcaacaaggagaaaaacaatgaagaaacataccatactctggacgaga aatttaggcttaaaaagaagagtcggttcacaccaaacaagggaagtgatatgtggttggatctttacatagagacagta aagagagacattgtatccaacttaaaacgttctggaaaacttaatcttacaaaacaagaacaatcggctttccaatgtct tctagataacgacgcaattgtaattcgcgctgcagataaaagatctggagttgttgtcatagacaagtcggattacgtat caaagcttgaaagggaaattgaaagcagtgctttgtataaaactacgcactcagataggacgcaagattcacttaaatct gtacgcaagctggccaataacatgttaaaagaaggcgcaatttgcaaagatatgtaccaatatctagttccacgttatcc gaaagcgggatctttgaagggtaatccgaagatacacaaatcgggggcaccaatgagaaccatagtcagcggtataaata ccccaacagaacagtttgcggaagtagcagaacacgtgttgaatcaatacgtggaaagttatccgtctttcaatcgtgat accacagactttataaatagattgcggcagattgaggaaccgctccctgaaaacgccattctttttacatttgatgtcga aaaattgtatccatcagtacctagagaggaaggtttagcagcctgccaacaggcattagaaatgagagttaaaccactta ttccaacgcactttgttattcaaatgataaggacagtgcttgacaacaataacttcaatttcggagatagaaattttcta caaacggacggggtagctataggatcgcgcttagagtcccccaaatcgcctctgttttacaaacggttcattgatgatgg ttttgggatatggacaggaagtgtagatgatctgcttgatttgagtaaacacgcaaataatattcaccaaaatataaaaa ttgaaatgaaatggagcgaggagaaaatcgagtttctggacactctagtgaaaattcaaaatggccgcataattacagac ctgtatcaaaagcctacggataagcagttgtacataagacatgactcttgtcatcctagtcacacaaagaaaaatcttcc gtatggactgggactacgtttgaaaagaatctgcacgagagaagaggattataaaaggcataggaatgaattaaaatctc agttgcggaaaaggggatatagcgataaaaagattgaacaacaattacaacaggtggaccagcttaaactggaggattta ctacaaacaaaaccaaacaaaaaagcagatgatagagtaccgctaattgtcacgttctcttaa |
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Protein
| Protein ID | pfu_aug2.0_552.1_07661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07661.t1 MAAEFAAHAALITCPDHPDEKLDSFCTVCDIRVCEGCRGDHKDHIWMRVNKLARFVRQNAETRCQDITQMKHDLKKNEEA EQNQIEDIRRIQRGRVAMVNDYAETLISEVKQRGEYTNMSAEFKKLDLMHDFFQNQLDTADDNVIMEMEEEFHIKKKRIS LPIQEVRFVEGTTASDVFCQMFGKKDSVSALKDKIQALEKERDMHKQCCEAFIKNSNKEVIEFEKRNQELKQILATEMAQ REKFKLLHEKDQQLICDLYDEIDELMQCYMPYHPMQHVQQQRTIPFQQPNAPSQHVPLPYENAQHKRGRRRSSRGTCMSV AIYGTEDLHSEVRQEICDYMSHHREKFECFTDCSIDQHIRNQRKMDGSINSWATEADIYAAAARYETNIKITMNKDKPEW HNHVLRINDDGTEETIKPSKHSIHLLLSNNHVTVLYVHQVDAIPTLNDPALACSTTQNETVDWFEMTPSSAQSLTEGAKP EAEVDRKPEVLKVVHDPAESDSYEVVGETIDLAGENESKSDRIKPQKSMSGREHGKKRFKLKDKGDKSMGGDTGVKAEFD HMNSNQDVVTNLSKYKLTREEISLLSKGIKFIPDKTKVNKEKNNEETYHTLDEKFRLKKKSRFTPNKGSDMWLDLYIETV KRDIVSNLKRSGKLNLTKQEQSAFQCLLDNDAIVIRAADKRSGVVVIDKSDYVSKLEREIESSALYKTTHSDRTQDSLKS VRKLANNMLKEGAICKDMYQYLVPRYPKAGSLKGNPKIHKSGAPMRTIVSGINTPTEQFAEVAEHVLNQYVESYPSFNRD TTDFINRLRQIEEPLPENAILFTFDVEKLYPSVPREEGLAACQQALEMRVKPLIPTHFVIQMIRTVLDNNNFNFGDRNFL QTDGVAIGSRLESPKSPLFYKRFIDDGFGIWTGSVDDLLDLSKHANNIHQNIKIEMKWSEEKIEFLDTLVKIQNGRIITD LYQKPTDKQLYIRHDSCHPSHTKKNLPYGLGLRLKRICTREEDYKRHRNELKSQLRKRGYSDKKIEQQLQQVDQLKLEDL LQTKPNKKADDRVPLIVTFS |
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