Gene
| Gene Model ID | pfu_aug2.0_552.1_07667 |
|---|---|
| Locus | scaffold552.1 : 238021 ... 247466 : + |
| To GenomeBrowser | scaffold552.1:238021..247466 |
| Genes list of scaffold | scaffold552.1 |
| Synonym | pfu_aug1.0_7511.1_52981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_552.1_07667.t1 | 2 | 1 | NACHT | 355 | 523 | 1.2e-08 | 34.7 | 1.7e-11 | 1.3e-07 | 31.4 |
| pfu_aug2.0_552.1_07667.t1 | 2 | 2 | NACHT | 710 | 748 | 1.2e-08 | 34.7 | 0.19 | 1400.0 | -1.3 |
Transcript
| Transcript ID | pfu_aug2.0_552.1_07667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07667.t1 atggcttcaagcccatatgcttcctccacagaaaccacatacgccagcagagttggtcgtgtactccttggaccatgttc agatcaactgcggtatattttacgatatcatgttaaacctgtggatttcccgagagtcatcaaacagcagaggtcaaaac tgcctaaactgactaaaccacaaatggatctcattttgccacaagcaggaaattactcggggaattacagtgatatggat atttcattgctatacctgttactaagaaacatttgtaaaattccagcacacagtgctggctggggaaaacaccctcttcc aagtgatattactctcgcagcaaatattgagataattcgaaatagcagaaaccttattggacattcaataagcgcctccc tatcgcataaagagttcaatgacatttggtcagctctaaagacggctgttgcagcaatggatgcatacctaaataataat aatacgtacgaagaggaattagatttccttaaaaatgaaacaatggatccagacgaagcgaaagagtatgaagataaaat acgtaagcaaagtgaggaggatgctgagacacgaaaactaattacagaaacaaagatgaaaatagtagaaaccaacgaac aaatggacgaggtatgtgaacttaatttaggatacataagcaaaacgtcaagtcgaaatatcagaatgctctattaaaac agacagtggtttcataagaaacaagaggaaacactgatacagctcaatatccatacatcccagattgcagaccttcaaca tgaagttcaacagaagcaagatatgctagataaaaaccttgactttaatgaattaaagcagaagttgcaagagttaaatg aaaaggaaacaaagagcattcctcttacgcaaattcaggaagggggcaataaattacccattgaacagctattttcttct gttgttgtaaaagaaaattccaatgattcacagcaaccgccgaaacgggtgaaaatacctgatgatattctgactataaa cggttctcgtgtaagtggtatatatatgcttggagatgctgcacatgggaaaacgacatattgtatgtggctcatcaagc attggtgcaatgcacagaagtttgctattactggtaaacaattgaatgattgggaagtagctttcggcaaatttgatttc gtctttcacgtatcattgggccatgtagacccatccatagctaacgtcaaagacatgatttgtcaggatatttttggaag ttatcctggtcttcaagaacaggcagatcatgtactatcttgtagtaaacacagttgtttcgtaattcttgacggtttag acgaatggaaaccaaaccagttagccattgatatgctgaaatataaagggtttcccaattctcataacatgtcacaatgt cttattttcattaccatgcgaccatggaagtttactgatatagcatgttcattgaacaccgacagtagagtgatcgaaat acttgggcttgatgacaacggtatcaacgaagtgataaataaagtacttgttcatcattataagataaagcaaggctctg ccgaatataagaaaaagcatgaaaagattatcagcaaattgaaagatacaacaattaagtcattcatacagattccgttg ttagcagttgtttgtgtgcaaatatggtatggcaacagacaagtagggaacagcatgacaagcttttattctgttatgac agatatgttgatagaaagagctttgtttcaaaataaatttccaatcttaagagataaggaacataaatactgcttaccag gcatattgtcagaagatgaaaatatcaattcgtacttctctacattgttgaagttaggaaaagtagcatacgaaggttta gtttctcaaaaaacgaaaataacttttgaaaaaagatggatagaaagagaaataggcaaagaagagttacggtttgccct tgcagttggtcttattagtcaaagagaagctccaagtttattaaaaaagactataattttacatttctttcacaaatcta tacaagagttcctggctgctctcctcattagtacaatagattcgatcaagaatatgtttttcaataagttaaccagtatc gaatccatcaaagagttctctaatgtcattatgtttatatgtggcatgtgtccttccatgggtagcttaatatcccagcg tgtcgcaagtttggcagacgaagttaaggatatttgtgaatacagggaatcagacggtggtgtaagaacggtgattgaac tgtacaagctacaggtcagttggtatatggagatgaagaataaacaaaaagacaacccggtggcattccatgcttcagat gtttatgttcgatatgatagtgacaaagatatcttgagggggaccagagaactcctgtctgatgaaaatgtcagaataaa aacactatgtttactatctgttcctactcatggagaagctagtattcctgatacggtattagatgcgtttctgtccaact cgagcaggactgattcactagatatggtctatatatatggcacttatactgatagatctgtacacacgatatctggacca aacatgagaaacttgtctctttggaatgtgtctgtaagagaattagactctgttgatagtcacgttttatcaaacatgaa aaggttagagaagctatatctatataacataagtctcgtcaacagagaaatcggactaagaaaagacatgacacagttaa gacaagtaaacttaaatgcagtattgatgcctccaagttcttggcggaggctgatcaaaagtttcattgatatccatcat catttttctgtaagacttgatggtactaacatagatacagattccaaaaaagcgattaaatcgtctcgtcatttctctga aatcaaggagtataatcgtcataaactaatctacgagttggagtttatcagaagatggccataa |
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Protein
| Protein ID | pfu_aug2.0_552.1_07667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07667.t1 MASSPYASSTETTYASRVGRVLLGPCSDQLRYILRYHVKPVDFPRVIKQQRSKLPKLTKPQMDLILPQAGNYSGNYSDMD ISLLYLLLRNICKIPAHSAGWGKHPLPSDITLAANIEIIRNSRNLIGHSISASLSHKEFNDIWSALKTAVAAMDAYLNNN NTYEEELDFLKNETMDPDEAKEYEDKIRKQSEEDAETRKLITETKMKIVETNEQMDEVCELNLGYISKTSSRNIRMLYXN RQWFHKKQEETLIQLNIHTSQIADLQHEVQQKQDMLDKNLDFNELKQKLQELNEKETKSIPLTQIQEGGNKLPIEQLFSS VVVKENSNDSQQPPKRVKIPDDILTINGSRVSGIYMLGDAAHGKTTYCMWLIKHWCNAQKFAITGKQLNDWEVAFGKFDF VFHVSLGHVDPSIANVKDMICQDIFGSYPGLQEQADHVLSCSKHSCFVILDGLDEWKPNQLAIDMLKYKGFPNSHNMSQC LIFITMRPWKFTDIACSLNTDSRVIEILGLDDNGINEVINKVLVHHYKIKQGSAEYKKKHEKIISKLKDTTIKSFIQIPL LAVVCVQIWYGNRQVGNSMTSFYSVMTDMLIERALFQNKFPILRDKEHKYCLPGILSEDENINSYFSTLLKLGKVAYEGL VSQKTKITFEKRWIEREIGKEELRFALAVGLISQREAPSLLKKTIILHFFHKSIQEFLAALLISTIDSIKNMFFNKLTSI ESIKEFSNVIMFICGMCPSMGSLISQRVASLADEVKDICEYRESDGGVRTVIELYKLQVSWYMEMKNKQKDNPVAFHASD VYVRYDSDKDILRGTRELLSDENVRIKTLCLLSVPTHGEASIPDTVLDAFLSNSSRTDSLDMVYIYGTYTDRSVHTISGP NMRNLSLWNVSVRELDSVDSHVLSNMKRLEKLYLYNISLVNREIGLRKDMTQLRQVNLNAVLMPPSSWRRLIKSFIDIHH HFSVRLDGTNIDTDSKKAIKSSRHFSEIKEYNRHKLIYELEFIRRWP |
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