Gene
| Gene Model ID | pfu_aug2.0_553.1_10919 |
|---|---|
| Locus | scaffold553.1 : 49737 ... 75395 : - |
| To GenomeBrowser | scaffold553.1:49737..75395 |
| Genes list of scaffold | scaffold553.1 |
| Synonym | pfu_aug1.0_2067.1_29968 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_553.1_10919.t3 | 1 | 1 | Myosin_TH1 | 2 | 116 | 1.0e-11 | 44.5 | 1.5e-15 | 1.1e-11 | 44.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_553.1_10919.t3 | gi|676438002|ref|XP_009048386.1| | hypothetical protein LOTGIDRAFT_238422 [Lottia gigantea] | 8.0e-30 |
| pfu_aug2.0_553.1_10919.t3 | gi|632957812|ref|XP_007894688.1| | PREDICTED: unconventional myosin-Ic isoform X3 [Callorhinchus milii] | 6.0e-19 |
| pfu_aug2.0_553.1_10919.t3 | gi|632957810|ref|XP_007894687.1| | PREDICTED: unconventional myosin-Ic isoform X2 [Callorhinchus milii] | 7.0e-19 |
| pfu_aug2.0_553.1_10919.t3 | gi|632957808|ref|XP_007894686.1| | PREDICTED: unconventional myosin-Ic isoform X1 [Callorhinchus milii] | 8.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_553.1_10919.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10919.t1 atggagaacgagctacacaaacgggatcatataggagtacaggattttgtgctcctggaggactacacaaatccttctgc ctttatagaaaacctcaggaaaagattcacagaaaatcttatctatacttacataggtcctgtactggtatctgtgaatc cttaccataatatagatatatacaaccaggacattatagagacttatagaaatgttaacttctacgagctgcctcctcat atatttgccattgctgatgcagcttaccgatctatgcgaggtgagaacaaaaatcaatgtattctgatttccggagaaag tggcgcaggaaagacagaagcttcaaagaaaatcttacattacctagcggccagctctaaacatacagacgatgtagaga gagttaaagatagacttctacaatctaatccactgctggaggcatttggtaatgctaaaactaacagaaatgacaactcc agtagatttgggaagtacatggacgttcagtttgattacaagggagctcctgtaggtggccatatactgaattaccttct ggagaagtcacgtgtggtacatcatgctgagggtgagcgtaatttccacattttttatcagctgctgagtggcgccaccc cactcctcatcagtaaactcaaactgagcaaagatcctgaacaatatttctacttgtcacaggggaagagtgttcgagtg gacagccttaatgatcaaagagatttccaggatgtgaagcatgctctggatgtatgtgacttcaacaaggaagaacaaga gggattatttgcgatagtagcatctgttctccatcttgggaaccttaagtttgaagaggacggccatggactggcgcata tcacagatttctctcccgtagaaactcttgctaagctgttgggttgtcaggaggaagttttgaaatcagcgctacagaat agaaccattgaggcaaaaggagaaaagatgaagtcgcctttgaataaagaccaagccttgtatgccagagatgccctggc caaaggtatatatgacagactcttcacatggattgtacataaggtcaatgactctctcacaaggaggaggcgcttaaagt gcagtttgatgggtctgttagacatatatggttttgaaatatttggagttaacagctttgagcagttttgtatcaactac tgtaacgaaaagttacagcagctatttatagaactgaccttgaaatccgagcaagaagagtatcaaagagagggtatagc gtgggagcctgtagagtactttaacaacaagattatatgtgaccttgtagaggctaagcctgttgggatcatcaccatta tggatgaggagtgtcttagacctggggaccctacagatcagactttcctagacaagctatctgagaatctacgactccac ccacactttgtcagccatactactgctacagatacagctgtcaggaaatctatacaaagagatgagttccgtctgttaca ttatgctggagatgtgacgtacaaagtgaaaggattcctggacaaaaataacgacttactcttcagagatcttaaggagg ccatgagtcagacatccaacctgatcaccaaatcctgttttcctacctcagaactgctcggcaagaaaaggcctgaaaca gcatctacacaattcaagactagcttagcccaacttatggaaatcctaatgtcaaaggagccgtcatacgtgagatgtat taaacccaatgactacaaacgctcagatatgtttgatgagaagatagtgtaccaccaagtgaaatatcttggattaatgg agaatttacgagtccgcagggcagggtttgcctacagaaggccatatgaagtctttttgaaaaggtacaagtccctatgt ccccagacttggcctcactatgatggcccagcaaaggagggagtggaaatcctagtcaattaccttaactatagtaatga tgactacagactaggaaaaacaaagttgtttataagatttccgagggtcctctttgccacagaagatgaattccagctca gaaaacaggacttggccaccttggtacagaaagtctacagggggtttgctcagaagaagaaattccgacttatgaaatcc tcagccattagattacaaagtcattggagaagatttgcagcacaaaaacttctggagaggaggaaatgggcagcacaaca actcagaaagtttgttaaaggttttatgttaaggaagagaccagagtgtgaggataacaaagacttcatcaaatacacca agtataacttcctcactcggttaaaggaccaagtaccaaaatcggtgctagataagcggtggccttcagcaccagaacta ttatcagagacatcagccctgctaaaggacctttgtatgagaaatctggtactgaaatatgtaaagggaatcagcaccgc tagaaaatcacagatggaacaaaaagtaatagcggagtcattattcagggggaagaaggagtcttatcctgagagtatca gggagctctttgttgacagtagactaacggacaaggatttccagctgaaagacaaagtaccatatcaacaaatgacgggt gtattgacaagtcgtatgggtgacggccttatagttgttactgtcaacactacagaaaatacctcaaagggagatctaat tttacatagtgatcacacaatagagactctgaccaagctggccattgtaggtcagaaaagtgaccttatccaagtggtca gtgaagctagtattacccatggtattgttggagggaagcagggctgtatagagtttacatcaggtgccatggataccata aagaaaggaaagaacggacatctactggtgatggtaggacaggaaatgaggaaccagtaa |
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| Transcript ID | pfu_aug2.0_553.1_10919.t2 |
| Definition | - |
>pfu_aug2.0_553.1_10919.t2 atggagaacgagctacacaaacgggatcatataggagtacaggattttgtgctcctggaggactacacaaatccttctgc ctttatagaaaacctcaggaaaagattcacagaaaatcttatctatacttacataggtcctgtactggtatctgtgaatc cttaccataatatagatatatacaaccaggacattatagagacttatagaaatgttaacttctacgagctgcctcctcat atatttgccattgctgatgcagcttaccgatctatgcgaggtgagaacaaaaatcaatgtattctgatttccggagaaag tggcgcaggaaagacagaagcttcaaagaaaatcttacattacctagcggccagctctaaacatacagacgatgtagaga gagttaaagatagacttctacaatctaatccactgctggaggcatttggtaatgctaaaactaacagaaatgacaactcc agtagatttgggaagtacatggacgttcagtttgattacaagggagctcctgtaggtggccatatactgaattaccttct ggagaagtcacgtgtggtacatcatgctgagggtgagcgtaatttccacattttttatcagctgctgagtggcgccaccc cactcctcatcagtaaactcaaactgagcaaagatcctgaacaatatttctacttgtcacaggggaagagtgttcgagtg gacagccttaatgatcaaagagatttccaggatgtgaagcatgctctggatgtatgtgacttcaacaaggaagaacaaga gggattatttgcgatagtagcatctgttctccatcttgggaaccttaagtttgaagaggacggccatggactggcgcata tcacagatttctctcccgtagaaactcttgctaagctgttgggttgtcaggaggaagttttgaaatcagcgctacagaat agaaccattgaggcaaaaggagaaaagatgaagtcgcctttgaataaagaccaagccttgtatgccagagatgccctggc caaaggtatatatgacagactcttcacatggattgtacataaggtcaatgactctctcacaaggaggaggcgcttaaagt gcagtttgatgggtctgttagacatatatggttttgaaatatttggagttaacagctttgagcagttttgtatcaactac tgtaacgaaaagttacagcagctatttatagaactgaccttgaaatccgagcaagaagagtatcaaagagagggtatagc gtgggagcctgtagagtactttaacaacaagattatatgtgaccttgtagaggctaagcctgttgggatcatcaccatta tggatgaggagtgtcttagacctggggaccctacagatcagactttcctagacaagctatctgagaatctacgactccac ccacactttgtcagccatactactgctacagatacagctgtcaggaaatctatacaaagagatgagttccgtctgttaca ttatgctggagatgtgacgtacaaagtgaaaggattcctggacaaaaataacgacttactcttcagagatcttaaggagg ccatgagtcagacatccaacctgatcaccaaatcctgttttcctacctcagaactgctcggcaagaaaaggcctgaaaca gcatctacacaattcaagactagcttagcccaacttatggaaatcctaatgtcaaaggagccgtcatacgtgagatgtat taaacccaatgactacaaacgctcagatatgtttgatgagaagatagtgtaccaccaagtgaaatatcttggattaatgg agaatttacgagtccgcagggcagggtttgcctacagaaggccatatgaagtctttttgaaaaggtacaagtccctatgt ccccagacttggcctcactatgatggcccagcaaaggagggagtggaaatcctagtcaattaccttaactatagtaatga tgactacagactaggaaaaacaaagttgtttataagatttccgagggtcctctttgccacagaagatgaattccagctca gaaaacaggacttggccaccttggtacagaaagtctacagggggtttgctcagaagaagaaattccgacttatgaaatcc tcagccattagattacaaagtcattggagaagatttgcagcacaaaaacttctggagaggaggaaatgggcagcacaaca actcagaaagtttgttaaaggttttatgttaaggaagagaccagagtgtgaggataacaaagacttcatcaaatacacca agtataacttcctcactcggttaaaggaccaagtaccaaaatcggtgctagataagcggtggccttcagcaccagaacta ttatcagagacatcagccctgctaaaggacctttgtatgagaaatctggtactgaaatatgtaaagggaatcagcaccgc tagaaaatcacagatggaacaaaaagtaatagcggagtcattattcagggggaagaaggagtcttatcctgagagtatca gggagctctttgttgacagtagactaaaaacgatgattctgattggccgagaaattttgttgatacctccatcaacagaa atcagaagtatgtgcttagcaatgtcataa |
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| Transcript ID | pfu_aug2.0_553.1_10919.t3 |
| Definition | - |
>pfu_aug2.0_553.1_10919.t3 atgacagagaaacacctatatttactagcggacaaggatttccagctgaaagacaaagtaccatatcaacaaatgacggg tgtattgacaagtcgtatgggtgacggccttatagttgttactgtcaacactacagaaaatacctcaaagggagatctaa ttttacatagtgatcacacaatagagactctgaccaagctggccattgtaggtcagaaaagtgaccttatccaagtggtc agtgaagctagtattacccatggtattgttggagggaagcagggctgtatagagtttacatcaggtgccatggataccat aaagaaaggaaagaacggacatctactggtgatggtaggacaggaaatgaggaaccagtaa |
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Protein
| Protein ID | pfu_aug2.0_553.1_10919.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10919.t1 MENELHKRDHIGVQDFVLLEDYTNPSAFIENLRKRFTENLIYTYIGPVLVSVNPYHNIDIYNQDIIETYRNVNFYELPPH IFAIADAAYRSMRGENKNQCILISGESGAGKTEASKKILHYLAASSKHTDDVERVKDRLLQSNPLLEAFGNAKTNRNDNS SRFGKYMDVQFDYKGAPVGGHILNYLLEKSRVVHHAEGERNFHIFYQLLSGATPLLISKLKLSKDPEQYFYLSQGKSVRV DSLNDQRDFQDVKHALDVCDFNKEEQEGLFAIVASVLHLGNLKFEEDGHGLAHITDFSPVETLAKLLGCQEEVLKSALQN RTIEAKGEKMKSPLNKDQALYARDALAKGIYDRLFTWIVHKVNDSLTRRRRLKCSLMGLLDIYGFEIFGVNSFEQFCINY CNEKLQQLFIELTLKSEQEEYQREGIAWEPVEYFNNKIICDLVEAKPVGIITIMDEECLRPGDPTDQTFLDKLSENLRLH PHFVSHTTATDTAVRKSIQRDEFRLLHYAGDVTYKVKGFLDKNNDLLFRDLKEAMSQTSNLITKSCFPTSELLGKKRPET ASTQFKTSLAQLMEILMSKEPSYVRCIKPNDYKRSDMFDEKIVYHQVKYLGLMENLRVRRAGFAYRRPYEVFLKRYKSLC PQTWPHYDGPAKEGVEILVNYLNYSNDDYRLGKTKLFIRFPRVLFATEDEFQLRKQDLATLVQKVYRGFAQKKKFRLMKS SAIRLQSHWRRFAAQKLLERRKWAAQQLRKFVKGFMLRKRPECEDNKDFIKYTKYNFLTRLKDQVPKSVLDKRWPSAPEL LSETSALLKDLCMRNLVLKYVKGISTARKSQMEQKVIAESLFRGKKESYPESIRELFVDSRLTDKDFQLKDKVPYQQMTG VLTSRMGDGLIVVTVNTTENTSKGDLILHSDHTIETLTKLAIVGQKSDLIQVVSEASITHGIVGGKQGCIEFTSGAMDTI KKGKNGHLLVMVGQEMRNQ |
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| Protein ID | pfu_aug2.0_553.1_10919.t2 |
| Definition | - |
>pfu_aug2.0_553.1_10919.t2 MENELHKRDHIGVQDFVLLEDYTNPSAFIENLRKRFTENLIYTYIGPVLVSVNPYHNIDIYNQDIIETYRNVNFYELPPH IFAIADAAYRSMRGENKNQCILISGESGAGKTEASKKILHYLAASSKHTDDVERVKDRLLQSNPLLEAFGNAKTNRNDNS SRFGKYMDVQFDYKGAPVGGHILNYLLEKSRVVHHAEGERNFHIFYQLLSGATPLLISKLKLSKDPEQYFYLSQGKSVRV DSLNDQRDFQDVKHALDVCDFNKEEQEGLFAIVASVLHLGNLKFEEDGHGLAHITDFSPVETLAKLLGCQEEVLKSALQN RTIEAKGEKMKSPLNKDQALYARDALAKGIYDRLFTWIVHKVNDSLTRRRRLKCSLMGLLDIYGFEIFGVNSFEQFCINY CNEKLQQLFIELTLKSEQEEYQREGIAWEPVEYFNNKIICDLVEAKPVGIITIMDEECLRPGDPTDQTFLDKLSENLRLH PHFVSHTTATDTAVRKSIQRDEFRLLHYAGDVTYKVKGFLDKNNDLLFRDLKEAMSQTSNLITKSCFPTSELLGKKRPET ASTQFKTSLAQLMEILMSKEPSYVRCIKPNDYKRSDMFDEKIVYHQVKYLGLMENLRVRRAGFAYRRPYEVFLKRYKSLC PQTWPHYDGPAKEGVEILVNYLNYSNDDYRLGKTKLFIRFPRVLFATEDEFQLRKQDLATLVQKVYRGFAQKKKFRLMKS SAIRLQSHWRRFAAQKLLERRKWAAQQLRKFVKGFMLRKRPECEDNKDFIKYTKYNFLTRLKDQVPKSVLDKRWPSAPEL LSETSALLKDLCMRNLVLKYVKGISTARKSQMEQKVIAESLFRGKKESYPESIRELFVDSRLKTMILIGREILLIPPSTE IRSMCLAMS |
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| Protein ID | pfu_aug2.0_553.1_10919.t3 |
| Definition | - |
>pfu_aug2.0_553.1_10919.t3 MTEKHLYLLADKDFQLKDKVPYQQMTGVLTSRMGDGLIVVTVNTTENTSKGDLILHSDHTIETLTKLAIVGQKSDLIQVV SEASITHGIVGGKQGCIEFTSGAMDTIKKGKNGHLLVMVGQEMRNQ |
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