Gene
| Gene Model ID | pfu_aug2.0_553.1_10920 |
|---|---|
| Locus | scaffold553.1 : 78076 ... 93512 : + |
| To GenomeBrowser | scaffold553.1:78076..93512 |
| Genes list of scaffold | scaffold553.1 |
| Synonym | pfu_aug1.0_13181.1_53912 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_553.1_10920.t1 | 2 | 1 | G-patch | 428 | 443 | 4.3e-08 | 32.8 | 0.29 | 2200.0 | -1.5 |
| pfu_aug2.0_553.1_10920.t1 | 2 | 2 | G-patch | 471 | 515 | 4.3e-08 | 32.8 | 5.8e-12 | 4.3e-08 | 32.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_553.1_10920.t1 | gi|585694840|ref|XP_006821897.1| | PREDICTED: G patch domain-containing protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_553.1_10920.t1 | gi|551494002|ref|XP_005798566.1| | PREDICTED: G patch domain-containing protein 3-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_553.1_10920.t1 | gi|658895344|ref|XP_008430524.1| | PREDICTED: G patch domain-containing protein 3 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_553.1_10920.t1 | gi|556961551|ref|XP_005991077.1| | PREDICTED: G patch domain-containing protein 3 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_553.1_10920.t1 | gi|657577069|ref|XP_008292345.1| | PREDICTED: G patch domain-containing protein 3 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_553.1_10920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10920.t1 atggaaaagaaacatgttgtttatgctgtaattaacaatattcctggtgattatcactctgcagatctaagaaattattt ttcacaatttatagaaacgagaggatttgaatgtttccattttagacatcgaccagaacttcagaagccgacaaataatt tggatggagtttcctctgatgataaaaattctaaacgagtcaaaactttatgctgtgttgttcaagtgaaagataataga gtttctgaacttatcaaaatgtatcacagaaaacactggttagacaggagaggtgacatcattccgagattttgccatat ttcacagatcgttacctctgaagactcggcaacatcacactcacagtcacagtctgccgattcagagttcacaaacattt cagaaaatctcatggaggcctccaagtacaagactcgtttggagcaaaagaaaataccagaaaatagagagatgtttacg aaagacgatttacagaaattaccagagttacacccccctgatatcatgccaaatggaaatgtaggaactccaacgatgat tttcatggagtacatcaaacaatgtcgcatgccaccgtcagtcatcaagaagttaggtttgtctttcccacgtatgagaa ccaacaagaaatacggcaatgtgccttttgattacggagggaacactgaggtgcaagaaggaggtgaagaggaggagatg gaggttctatcaggcagtggtcatgtgatacaaggggaacaatcaaatacaaacgtaaaagcggcagatagtatgacttc caaagttgggactgaaaaagaaacagaaattccccctgaagctgaaaataatgatgaaaatataacaacaaactctaagg gtaaagacatgtcaaaatcacgacggagaaagaagaaacctaagatggatgcagaggccagacgtaggatgaaacttaac attgaggaaaaaatgattcacaataacagcagctcggggtcaggggaggacaatgacagttgtgaggagtgggagagaca cgaggcgttgtatgacgacccgaccaaccaggagcggaataaagacaggctgtttgaggagaaaatagaactgaaatggg aaaaaggagggagtggacttgtcttctatactgatgctcagtactggcaagcccaggaaggggattttgatgagcagaca gcagatgactgggatgttgacatgagtatatactatgagaaaggtgccggtgataaagacgctagggactatgtcaccat gcgtcaggaacagcggagacgtgatggtgtggaagccacagaccgatatagcgcaggaatcgcacgaaaaaggggaaaac catcggcagcagagaccagtgaagggatagggaagtttgaacaatactcgaaaggtgtgggtcgtaaaatcatggagaaa caaggatggacggagggagaggggctaggatcaacaattaaagggatgagtgatgcattagaaaatgagggacagaatcc aacagacaaatcaggttttggctacagaggagagaaacttataagacactcgataaagaaaccaaggacagctgacaaag atgttattatatctacgaaatacgacaaaccgtcggaaacggaccctcctgaaccgttactacgtagacatgaaccgtac cacatcacatatagacataaagtggacttccaacctcagaaagatacacaagactga |
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Protein
| Protein ID | pfu_aug2.0_553.1_10920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10920.t1 MEKKHVVYAVINNIPGDYHSADLRNYFSQFIETRGFECFHFRHRPELQKPTNNLDGVSSDDKNSKRVKTLCCVVQVKDNR VSELIKMYHRKHWLDRRGDIIPRFCHISQIVTSEDSATSHSQSQSADSEFTNISENLMEASKYKTRLEQKKIPENREMFT KDDLQKLPELHPPDIMPNGNVGTPTMIFMEYIKQCRMPPSVIKKLGLSFPRMRTNKKYGNVPFDYGGNTEVQEGGEEEEM EVLSGSGHVIQGEQSNTNVKAADSMTSKVGTEKETEIPPEAENNDENITTNSKGKDMSKSRRRKKKPKMDAEARRRMKLN IEEKMIHNNSSSGSGEDNDSCEEWERHEALYDDPTNQERNKDRLFEEKIELKWEKGGSGLVFYTDAQYWQAQEGDFDEQT ADDWDVDMSIYYEKGAGDKDARDYVTMRQEQRRRDGVEATDRYSAGIARKRGKPSAAETSEGIGKFEQYSKGVGRKIMEK QGWTEGEGLGSTIKGMSDALENEGQNPTDKSGFGYRGEKLIRHSIKKPRTADKDVIISTKYDKPSETDPPEPLLRRHEPY HITYRHKVDFQPQKDTQD |
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