Gene
| Gene Model ID | pfu_aug2.0_553.1_10921 |
|---|---|
| Locus | scaffold553.1 : 95475 ... 161775 : - |
| To GenomeBrowser | scaffold553.1:95475..161775 |
| Genes list of scaffold | scaffold553.1 |
| Synonym | pfu_aug1.0_12040.1_24970 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium calmodulin-dependent protein kinase kinase 2 isoform x1 | GO:0000166 GO:0004672 GO:0006468 GO:0043167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_553.1_10921.t1 | 2 | 1 | Pkinase | 233 | 270 | 0.0 | 187.4 | 2.8e-07 | 0.0014 | 17.8 |
| pfu_aug2.0_553.1_10921.t1 | 1 | 1 | Pkinase_Tyr | 260 | 464 | 4.6e-25 | 88.1 | 1.7e-27 | 8.5e-24 | 84.0 |
| pfu_aug2.0_553.1_10921.t1 | 2 | 2 | Pkinase | 281 | 470 | 0.0 | 187.4 | 0.0 | 0.0 | 167.3 |
| pfu_aug2.0_553.1_10921.t1 | 1 | 1 | Kinase-like | 325 | 458 | 1.2e-06 | 27.6 | 4.2e-10 | 2.1e-06 | 26.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_553.1_10921.t1 | gi|676448553|ref|XP_009051770.1| | hypothetical protein LOTGIDRAFT_104050, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_553.1_10921.t1 | gi|657586481|ref|XP_008297489.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 1 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_553.1_10921.t1 | gi|591366994|ref|XP_007058349.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_553.1_10921.t1 | gi|530617994|ref|XP_005298721.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_553.1_10921.t1 | gi|530617990|ref|XP_005298719.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_553.1_10921.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10921.t1 atggattttacacagttgtcgttagatttcaggaaatgccatgtggaaagtttcggcgacaaagcggaagtcgtgagcac aagcgatcctgtgttagcgttagaagacaattctacttcattctgcggcagtaagcagagtgacgtcatcagcagcaaaa acgaaagtacaataactaacgataatcagaagaaaacgattacgagtcatggtaaagaaaattatcaagtatctagttta aaatcgacagaccaagcgtatccaagaaaatacccgctcgctcgtaaaagttcgaatatcacaaacgattctggtcgtag ctcagtcagtgaaaacgaggatttgttcaaggacgaggatgatgatgggttgccaaggcgacacagcgtcacggtagttg atgcaacaggacatctagatgtgccgaataatgttgatactataacgtcaaatttgattccggaagtgaacaaaaaagta gaacatttgataaggactagcaatagcagtgttgttactgacacaaggcatggacctaagatcgtgtatagtttgtccga ggaggtcataggtaaccgccatagacgttctcccgcggggtcaccgggggcatcacctaggttacggagacagccaacca tggaaacgaggcgggtgtcagtatccgatgcaaatggatatgtacagttgaatcaatataagctcaaaagtgaaatagga aagggatcgtatggtattgttaaactcgctcacaacgaacaggacgacgttcactatgcaatgaaaattctttcaaagaa aaggttgatgaagaaggccgggtttttccaagtcctagacgatccagaggaggataatctgtacatggcttttgaattgc tggaaaaaggggaggttctggtggtacctacagacagtccattgtcagaggatcagacttggtcatacttcagggatatc atattagggatagaatatttacattaccaaaaaataatccaccgagacataaaaccctcaaatctactacttggtgatga cggccatctcaagatagcagattttggggtcagcaatgagttttcagggagtgacatcatgctcacaaatacggcaggga ccccggctttcatggctccagaaacactgagagaggagaaagaaaactttggagggaaggcattagatatatgggccatg ggagtcactctatattgtttgctgattggaaagtgtccttttgaagatgagtttcctttaggattacacaagaagataat gacagaccctgtcagattcccagataaaactgtgatatcagaagactgtagggatttgataatgaagatgctggagaaga atccagataacagaatatctctcccggagatcaaggttcatccatgggtaacaaaggatggggaattccccttacccact gaagaagaaaactgcatccttgtcactgttacagatgaagacttggataatgtcgttaaacatgtgccaaaattagatac tctgattttagtgaagagtatcttgaaacataaatccttcaagaatccgtaccgggataagagccttgttaaggaggaat tccagagatctggacgttcttactccgctccggacacatttcacagagtcgtcaaaaggaaaatctcccaagaagcacat gtcagctcaactttggcggagaactcatga |
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Protein
| Protein ID | pfu_aug2.0_553.1_10921.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10921.t1 MDFTQLSLDFRKCHVESFGDKAEVVSTSDPVLALEDNSTSFCGSKQSDVISSKNESTITNDNQKKTITSHGKENYQVSSL KSTDQAYPRKYPLARKSSNITNDSGRSSVSENEDLFKDEDDDGLPRRHSVTVVDATGHLDVPNNVDTITSNLIPEVNKKV EHLIRTSNSSVVTDTRHGPKIVYSLSEEVIGNRHRRSPAGSPGASPRLRRQPTMETRRVSVSDANGYVQLNQYKLKSEIG KGSYGIVKLAHNEQDDVHYAMKILSKKRLMKKAGFFQVLDDPEEDNLYMAFELLEKGEVLVVPTDSPLSEDQTWSYFRDI ILGIEYLHYQKIIHRDIKPSNLLLGDDGHLKIADFGVSNEFSGSDIMLTNTAGTPAFMAPETLREEKENFGGKALDIWAM GVTLYCLLIGKCPFEDEFPLGLHKKIMTDPVRFPDKTVISEDCRDLIMKMLEKNPDNRISLPEIKVHPWVTKDGEFPLPT EEENCILVTVTDEDLDNVVKHVPKLDTLILVKSILKHKSFKNPYRDKSLVKEEFQRSGRSYSAPDTFHRVVKRKISQEAH VSSTLAENS |
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