Gene
| Gene Model ID | pfu_aug2.0_553.1_10925 |
|---|---|
| Locus | scaffold553.1 : 267828 ... 273297 : + |
| To GenomeBrowser | scaffold553.1:267828..273297 |
| Genes list of scaffold | scaffold553.1 |
| Synonym | pfu_aug1.0_4819.1_37987 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_553.1_10925.t1 | 1 | 1 | PALP | 12 | 281 | 0.0 | 220.2 | 0.0 | 0.0 | 220.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_553.1_10925.t1 | gi|676488425|ref|XP_009064612.1| | hypothetical protein LOTGIDRAFT_236146 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_553.1_10925.t1 | gi|325296821|ref|NP_001191652.1| | serine dehydratase [Aplysia californica] | 0.0 |
| pfu_aug2.0_553.1_10925.t1 | gi|585685380|ref|XP_002737724.2| | PREDICTED: serine dehydratase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_553.1_10925.t1 | gi|742208326|ref|XP_010895603.1| | PREDICTED: L-serine dehydratase/L-threonine deaminase [Esox lucius] | 0.0 |
| pfu_aug2.0_553.1_10925.t1 | gi|530627531|ref|XP_005303280.1| | PREDICTED: L-serine dehydratase/L-threonine deaminase [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_553.1_10925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10925.t1 atgggaacgccaagtgacgccttacatatagtgacgccaaccattcttagccatcctatgaccaaggtagccggaatcaa tgtatacatcaaattagacaatctacaaattccgggaagttttaaaatcagaggcatcggcaatttctgtaaaaaggcca aagcccgaggatgtaagaagatcgtgtgtgcgtctggaggtaacgcaggattggcggcagcttacgccgcacatcaactt aatcttcaagcaaccatcgttcttcctaagacaacaccaggatttgtggctgacaaactaagagactttggagcggaagt agaaatccacgggaatgtatggaatgaggcaaatagctacgcccaaactttagcagcagatcccgaatgtgagtacgttc atccgtttgaccacaaagacacctgggaaggacatgaaactataattaaggaagccgtatgccagatgaccacgccccct gacgttgtgatcacgtgtgtaggaggagggggtctccttaatggtattattcagggaatgcaaaacaacggttggcagaa tatccccatcattgccatggaaacagttggagcagactgcctgaatgcgtctctggctgctgataagattgtaaccttgc caaccattacaagtgtagcgaaatgtctcggtgcccttactccatcatctacgacttttgagtattgtaagaaatataac atcatctcagatcttgtaacagacaagcaagcgattgacgcatgcctcagatttgcagatgaccacaggatgctggtaga acctgcatgtggcgcttccctggcagctatttatagtaatattatcccaaagttacagagtcagaacaaactcggaccag ttaaaaatgcattcctcttggtgtgtggcggaagtggagtaacgctggaatctttacaaaactggaagcaggagtttggc gtatga |
|
Protein
| Protein ID | pfu_aug2.0_553.1_10925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_553.1_10925.t1 MGTPSDALHIVTPTILSHPMTKVAGINVYIKLDNLQIPGSFKIRGIGNFCKKAKARGCKKIVCASGGNAGLAAAYAAHQL NLQATIVLPKTTPGFVADKLRDFGAEVEIHGNVWNEANSYAQTLAADPECEYVHPFDHKDTWEGHETIIKEAVCQMTTPP DVVITCVGGGGLLNGIIQGMQNNGWQNIPIIAMETVGADCLNASLAADKIVTLPTITSVAKCLGALTPSSTTFEYCKKYN IISDLVTDKQAIDACLRFADDHRMLVEPACGASLAAIYSNIIPKLQSQNKLGPVKNAFLLVCGGSGVTLESLQNWKQEFG V |
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