Gene
| Gene Model ID | pfu_aug2.0_554.1_14294 |
|---|---|
| Locus | scaffold554.1 : 15012 ... 39275 : - |
| To GenomeBrowser | scaffold554.1:15012..39275 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | pfu_aug1.0_8468.1_24400 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_554.1_14294.t1 | 4 | 1 | RGS | 94 | 181 | 4.7e-32 | 110.5 | 9.2e-08 | 0.0014 | 18.7 |
| pfu_aug2.0_554.1_14294.t1 | 4 | 2 | RGS | 237 | 267 | 4.7e-32 | 110.5 | 0.34 | 5000.0 | -2.5 |
| pfu_aug2.0_554.1_14294.t1 | 4 | 3 | RGS | 317 | 398 | 4.7e-32 | 110.5 | 1.3e-12 | 1.9e-08 | 34.4 |
| pfu_aug2.0_554.1_14294.t1 | 4 | 4 | RGS | 413 | 537 | 4.7e-32 | 110.5 | 4.4e-19 | 6.5e-15 | 55.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_554.1_14294.t1 | gi|701388846|ref|XP_009989338.1| | PREDICTED: A-kinase anchor protein 10, mitochondrial [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_554.1_14294.t1 | gi|524899722|ref|XP_005106289.1| | PREDICTED: A-kinase anchor protein 10, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_554.1_14294.t1 | gi|532012328|ref|XP_005349951.1| | PREDICTED: A-kinase anchor protein 10, mitochondrial [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_554.1_14294.t1 | gi|167736404|ref|NP_001108078.1| | A-kinase anchor protein 10, mitochondrial [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_554.1_14294.t1 | gi|698412766|ref|XP_009693589.1| | PREDICTED: A-kinase anchor protein 10, mitochondrial [Cariama cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_554.1_14294.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14294.t1 atgtcttttttccgccgtaggaaagaaaagaagcctaatgaccttcctgtcaaacagtcatctactgccataagaaggtc gccatctcagcgcagtaccccatcacccctcactcaaaatggagatattgaaggccccttaattcctgctgtagagtttg ggctggcagataaacctgtcaaactgatagtagaggaagaggactttgatcctggagatttaggaaattacaacaaatcc cagaatgccacatggaatacagcgtctcgtttatcaaagagtctacaggaggttctgaaagataaagatgccttatcgtg tctcattcactttatggattctcgtaaggctggtgctctaatacgattctggtgtgacgctgacagtttccaagcggcaa catggagtcgaatacggacacattcccttaacgtcaccagacaaaatactttttcaggaagagggaggcaacagacagaa gcaaaatctcctagtagtgattcatgcagtaaggtactcaaagattatgtggactccagtagtataagttctagtcagac actgtcggaagaaaagacaagccctcgtgttttacccgaagacgaattagccccgcaactttcaccgaattcatctagtg ctaataatgacatccaccagaatatatcgggatctactcagaatactgtcgatgtgtcttctataaccccagctgtgata tcaccacctacttcttcaaacctatcagacttacatacagacacacaaaggaacgtacatactaatatacagaccgaaag tcaaatatctacctgtgatagtgctgcatctcacttggttcgttcagtggacggcagtgtttccccaggaatattagagc cccctggtgccgaaacatccatacatgtatctccaccaaaacctgcacgttcaaaaagtcttacagtagcagatttagct gaaaaattaaaaagaagtatagaaagagatgctgtttcaatattccaaaaatatctatcccatgatgcctcaaatcctgt cggtatttctgatcaactcagaaatgaatgtatacgcaaaatttgtagagaggatggagaggtggatcctaactgcttca tggagtgccaaacttttatacttaataaaataaacctggaatatttttctgagtttttgtccagtgcattccactacaga catcaaatcaacgtgttaacggggtctatagtttgccttaatgatatcctgtacaatgaagggtcaatattctacttcat ggagtatatggaacaagagggaggcagtaacctactccagttcttactagcggtagataatttccacaaacatttgatct cactgggtgaaggatacgatggtacggaagcacagactgacgctatggtcatctatgacaaatatttttccctccaagca agtcatccgttaggatttgatgataagatcaggtttgatgtagagtgtaatatatgtagagaagaaggcccgttacctga ctgctttcttaaaccacgtagtattgtactcagaacaatggaaaagatgtattttcctggatttttacaaagtgatatct actacaaatacttgtcagagctggttagcacagtccagattgcctctgacctaccccaaaaacctaaacatcgaagacaa ggctcaggtatttttaagaaaaagaagaaaaaagaaaaggaggaagaagaaatggctcttaaaatagcgcaaatgattat cagtgatgtcacttccgttacccaggcgataggtgcaataaaaaattcagaacctgaaacggagggagaaaatgcggaat cctga |
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Protein
| Protein ID | pfu_aug2.0_554.1_14294.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14294.t1 MSFFRRRKEKKPNDLPVKQSSTAIRRSPSQRSTPSPLTQNGDIEGPLIPAVEFGLADKPVKLIVEEEDFDPGDLGNYNKS QNATWNTASRLSKSLQEVLKDKDALSCLIHFMDSRKAGALIRFWCDADSFQAATWSRIRTHSLNVTRQNTFSGRGRQQTE AKSPSSDSCSKVLKDYVDSSSISSSQTLSEEKTSPRVLPEDELAPQLSPNSSSANNDIHQNISGSTQNTVDVSSITPAVI SPPTSSNLSDLHTDTQRNVHTNIQTESQISTCDSAASHLVRSVDGSVSPGILEPPGAETSIHVSPPKPARSKSLTVADLA EKLKRSIERDAVSIFQKYLSHDASNPVGISDQLRNECIRKICREDGEVDPNCFMECQTFILNKINLEYFSEFLSSAFHYR HQINVLTGSIVCLNDILYNEGSIFYFMEYMEQEGGSNLLQFLLAVDNFHKHLISLGEGYDGTEAQTDAMVIYDKYFSLQA SHPLGFDDKIRFDVECNICREEGPLPDCFLKPRSIVLRTMEKMYFPGFLQSDIYYKYLSELVSTVQIASDLPQKPKHRRQ GSGIFKKKKKKEKEEEEMALKIAQMIISDVTSVTQAIGAIKNSEPETEGENAES |
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