Gene
| Gene Model ID | pfu_aug2.0_554.1_14296 |
|---|---|
| Locus | scaffold554.1 : 60356 ... 62853 : + |
| To GenomeBrowser | scaffold554.1:60356..62853 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | pfu_aug1.0_3678.1_37658 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_554.1_14296.t1 | 1 | 1 | 7tm_1 | 51 | 305 | 1.1e-19 | 70.6 | 1.9e-23 | 1.4e-19 | 70.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_554.1_14296.t1 | gi|560920259|ref|XP_006186345.1| | PREDICTED: LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 5A [Camelus ferus] | 2.0e-08 |
| pfu_aug2.0_554.1_14296.t1 | gi|743720186|ref|XP_010953882.1| | PREDICTED: 5-hydroxytryptamine receptor 5A [Camelus bactrianus] | 8.0e-08 |
| pfu_aug2.0_554.1_14296.t1 | gi|742137205|ref|XP_010877899.1| | PREDICTED: cannabinoid receptor type 1A-like [Esox lucius] | 6.0e-07 |
| pfu_aug2.0_554.1_14296.t1 | gi|560978155|ref|XP_006211347.1| | PREDICTED: 5-hydroxytryptamine receptor 5A [Vicugna pacos] | 7.0e-07 |
| pfu_aug2.0_554.1_14296.t1 | gi|688585223|ref|XP_009289337.1| | PREDICTED: 5-hydroxytryptamine receptor 4 [Danio rerio] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_554.1_14296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14296.t1 atgaatagtacaacatgtccatgtcatttgcaagagacaacaacaagtaatgttaccatgaagacagacaatggcgggat cactcacggcactattggcgtcattgtcttttccatctccagtgcgttagttgccttcgcgttcgtatctaacctctgca tacaaacattacttttaaccagacgagcactgaggaagcagacatacaccgtcttggtgctgtcgttgggattcggagac atcctgatttcaatttccggtattctgtggctggttctacagaaagcaaacatttcctttcagacgccactatgtggtat gatgttgtccttgtttgtcatcggtacatttttgtcgctatacattacttttctaatatgtcttaatagattcttagtaa ctgtagatgccccaatgaataagattctattcagcggtacgaggaaattctggcttatgattattccaagcttgatagat gttatattgattatgtcgctgagcccattatgggggaagaacataacacaatgtaacgttaaaagtgttttcggaggaga aaagataactttcggcgttgtgttgatgttgaccaacataccgttgcttgtatcaaccattgttttgtatatagctcttg ttcgaaaactgatgaaaaagtttgtcaacgtcgatgttcagtcaagtgaaataaattctggagttaccatggcaacatcg acacatgagaagaaacagcagcgcatgcgtgccgtcaaaaccctaggaatcatcctggtttttctcgtattctgcacgtc acctttcatcttttcaatggtaggaagtctatttggcatcgaattaaagcagacccatcgtataatactaacttgggcac aaatgatcaatgcattcgccaaccctatcatttacacgtggcgaataaggacactgcagtatgaaattagaaacatattt tcaggatgtcatcaaggatttgattaa |
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Protein
| Protein ID | pfu_aug2.0_554.1_14296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14296.t1 MNSTTCPCHLQETTTSNVTMKTDNGGITHGTIGVIVFSISSALVAFAFVSNLCIQTLLLTRRALRKQTYTVLVLSLGFGD ILISISGILWLVLQKANISFQTPLCGMMLSLFVIGTFLSLYITFLICLNRFLVTVDAPMNKILFSGTRKFWLMIIPSLID VILIMSLSPLWGKNITQCNVKSVFGGEKITFGVVLMLTNIPLLVSTIVLYIALVRKLMKKFVNVDVQSSEINSGVTMATS THEKKQQRMRAVKTLGIILVFLVFCTSPFIFSMVGSLFGIELKQTHRIILTWAQMINAFANPIIYTWRIRTLQYEIRNIF SGCHQGFD |
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