Gene
| Gene Model ID | pfu_aug2.0_554.1_14301 |
|---|---|
| Locus | scaffold554.1 : 163180 ... 164733 : - |
| To GenomeBrowser | scaffold554.1:163180..164733 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | pfu_aug1.0_123986.1_28286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_554.1_14301.t1 | 1 | 1 | UPF0061 | 2 | 259 | 0.0 | 278.4 | 0.0 | 0.0 | 278.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_554.1_14301.t1 | gi|260794897|ref|XP_002592443.1| | hypothetical protein BRAFLDRAFT_113831 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_554.1_14301.t1 | gi|291227954|ref|XP_002733947.1| | PREDICTED: selenoprotein O-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_554.1_14301.t1 | gi|676466803|ref|XP_009057684.1| | hypothetical protein LOTGIDRAFT_122035 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_554.1_14301.t1 | gi|548356808|ref|XP_005730526.1| | PREDICTED: selenoprotein O-like isoform X3 [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_554.1_14301.t1 | gi|554843600|ref|XP_005932173.1| | PREDICTED: selenoprotein O-like isoform X1 [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_554.1_14301.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14301.t1 atgctgggggagtacgtcaataggaaaggagagaggtgggaactacagttgaaaggatcggggctgacaccgtattctag gagaggagatggcagagctgtgctcagatcatctataagagaattcctgggcagtgaggcaatgtatcatttagggattc ctaccagcagagctgctgctttggttgtttcagatgaccctgttatgcgagataaattctatgacggtcatccgcaggta gaacgaggggcggttgttctgagattggcccagtcatggttcagaataggctcgatagagatccttaccaaaaacagaga aattggtttgctgaggagattggtggattttgtaattgagcatcatttcccagaaattgacttgtttgacgaagatagat atttacaactattcagtacaatagtgcgtcaaactgcggaaatgattgccaagtggcagagtgtaggattcacacatggt gtatgtaacaccgataactatagtctcctgtctataactatagattatggtccatttggatttctggatgagtataatcc agattttattccgaacacgtcggatgacgaagggcgatataattatagaaaacagccagatattggtctgtggaatctcg ataaattacgaatcgctatgctacctctgctcaatcaggatcaaaagaaacagatggctaatattttgaacgggtatgaa agtatttattctaagctatatatagaaacgtttttgaagaaacttggtttgaaaacnacgaagaaaggataa |
|
Protein
| Protein ID | pfu_aug2.0_554.1_14301.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14301.t1 MLGEYVNRKGERWELQLKGSGLTPYSRRGDGRAVLRSSIREFLGSEAMYHLGIPTSRAAALVVSDDPVMRDKFYDGHPQV ERGAVVLRLAQSWFRIGSIEILTKNREIGLLRRLVDFVIEHHFPEIDLFDEDRYLQLFSTIVRQTAEMIAKWQSVGFTHG VCNTDNYSLLSITIDYGPFGFLDEYNPDFIPNTSDDEGRYNYRKQPDIGLWNLDKLRIAMLPLLNQDQKKQMANILNGYE SIYSKLYIETFLKKLGLKXTKKG |
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