Gene
| Gene Model ID | pfu_aug2.0_554.1_14303 |
|---|---|
| Locus | scaffold554.1 : 179005 ... 189343 : - |
| To GenomeBrowser | scaffold554.1:179005..189343 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | pfu_aug1.0_1207.1_65882 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_554.1_14303.t2 | 1 | 1 | IQ | 479 | 498 | 3.1e-06 | 26.3 | 2.0e-09 | 1.0e-05 | 24.7 |
Transcript
| Transcript ID | pfu_aug2.0_554.1_14303.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14303.t1 atggcggcttcaaacgtgatgcctgctgggatgacaaccactgaaaccatcggtgttgaaccgacattgcatatgaaact tcaaatgcctcatcctccaaatagtaaatatcctggaccgggtggtggcatgagtaaaatgaggcaaaagttaaggcttg acccctccagggcattagagcctgcaagaaagaaaattgcaactatagaggctcagcgtgttatgtccgtatttgaggac acaataacaaaaacggagattgtgacactgcttccgtttattttagaaaatcgagaaaggtttcgtgtaagccttggtgc agagctttcccttttgttagacattcataaaaacactgttgatagttatgaagaaataaaacaacagcttgatattcagt tacgtagaaataaagaaccgtccagagctgtgccaagatcgcccaacgatctccaatcagacatccaggatgacacattt catgatacaactggcgagagaggggtaaccacagaaggcgaagaaatgagtcctcccgcaagtccaaatgatggcaaagc tactaccacaggtcgcagtagtgcaggaagtaacaggtcagaagttcagtcagtaatgagctacgacagtcaaacagagc gcaccatgagaaatcttagtcttgtggcacagcagttgtctagctcttgtaagaacatacttagagcgttttctgccaat ccaaatgtgctgagcatgataaagaatcaagctagaagagatcccttgagtaaaggggtatgtactcaactgaatgagct gaaggacattttaatgaacaagcttttgactactccagaggaagaaaaggaacgcatgctatacatacaagaaatatcaa agagagagaggcacaatgctggaatcattgatgacctggagaccaaactgaaagctgctatggatgacaaagatgatgag ataaagaagaaaaatgcagtgattaggaagcttcaggctgatctacgacaaatcgaaaagttctcagaggaaaataataa acgagtaaccaatgaagcagagaaacaggagtcagctgaccttaagaatagtgatggcaagaagcagaggctgactcaag agctgaatcagctcaaaacacaactccaaaatctgataatggagcacagggaaaatgagcaggaattgagaagaaaaaaa ttccgtgtggagtcacaagtggagaattggattcaaaagtatgatggagacatgaatgaaagacagacggagtatgagga gatagatgccctgtacacaggagagaagaaacagctacatgagctggaggagagatttaaaacactagaggcagagtatc aacagatcatggaggaacgacgcgtggccagggaaaaacgagaagctgccgagcgcgaaatggctagtatggtgaaagca gccactacgatacaagcgttctggagatcgttcaaagtcagaaaggctcttaaggccaggaagaagaaaggaggcggaaa gaagaaaaacttttctcaaattttgaatgaaaatgatcataaatggagcacttattgtgttaatttcaaacacagagcga ttctgcatagaggttga |
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| Transcript ID | pfu_aug2.0_554.1_14303.t2 |
| Definition | - |
>pfu_aug2.0_554.1_14303.t2 atggcggcttcaaacgtgatgcctgctgggatgacaaccactgaaaccatcggtgttgaaccgacattgcatatgaaact tcaaatgcctcatcctccaaatagtaaatatcctggaccgggtggtggcatgagtaaaatgaggcaaaagttaaggcttg acccctccagggcattagagcctgcaagaaagaaaattgcaactatagaggctcagcgtgttatgtccgtatttgaggac acaataacaaaaacggagattgtgacactgcttccgtttattttagaaaatcgagaaaggtttcgtgtaagccttggtgc agagctttcccttttgttagacattcataaaaacactgttgatagttatgaagaaataaaacaacagcttgatattcagt tacgtagaaataaagaaccgtccagagctgtgccaagatcgcccaacgatctccaatcagacatccaggatgacacattt catgatacaactggcgagagaggggtaaccacagaaggcgaagaaatgagtcctcccgcaagtccaaatgatggcaaagc tactaccacaggtcgcagtagtgcaggaagtaacaggtcagaagttcagtcagtaatgagctacgacagtcaaacagagc gcaccatgagaaatcttagtcttgtggcacagcagttgtctagctcttgtaagaacatacttagagcgttttctgccaat ccaaatgtgctgagcatgataaagaatcaagctagaagagatcccttgagtaaaggggtatgtactcaactgaatgagct gaaggacattttaatgaacaagcttttgactactccagaggaagaaaaggaacgcatgctatacatacaagaaatatcaa agagagagaggcacaatgctggaatcattgatgacctggagaccaaactgaaagctgctatggatgacaaagatgatgag ataaagaagaaaaatgcagtgattaggaagcttcaggctgatctacgacaaatcgaaaagttctcagaggaaaataataa acgagtaaccaatgaagcagagaaacaggagtcagctgaccttaagaatagtgatggcaagaagcagaggctgactcaag agctgaatcagctcaaaacacaactccaaaatctgataatggagcacagggaaaatgagcaggaattgagaagaaaaaaa ttccgtgtggagtcacaagtggagaattggattcaaaagtatgatggagacatgaatgaaagacagacggagtatgagga gatagatgccctgtacacaggagagaagaaacagctacatgagctggaggagagatttaaaacactagaggcagagtatc aacagatcatggaggaacgacgcgtggccagggaaaaacgagaagctgccgagcgcgaaatggctagtatggtgaaagca gccactacgatacaagcgttctggagatcgttcaaagtcagaaaggctcttaaggccaggaagaagaaaggaggcggaaa gaagaaaaacttttctcaaattttgaatgaaaatgatcataaatggagcacttattgtgttaatttcaaacacagagcta aatgtagatcgattctgcatagaggttga |
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Protein
| Protein ID | pfu_aug2.0_554.1_14303.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14303.t1 MAASNVMPAGMTTTETIGVEPTLHMKLQMPHPPNSKYPGPGGGMSKMRQKLRLDPSRALEPARKKIATIEAQRVMSVFED TITKTEIVTLLPFILENRERFRVSLGAELSLLLDIHKNTVDSYEEIKQQLDIQLRRNKEPSRAVPRSPNDLQSDIQDDTF HDTTGERGVTTEGEEMSPPASPNDGKATTTGRSSAGSNRSEVQSVMSYDSQTERTMRNLSLVAQQLSSSCKNILRAFSAN PNVLSMIKNQARRDPLSKGVCTQLNELKDILMNKLLTTPEEEKERMLYIQEISKRERHNAGIIDDLETKLKAAMDDKDDE IKKKNAVIRKLQADLRQIEKFSEENNKRVTNEAEKQESADLKNSDGKKQRLTQELNQLKTQLQNLIMEHRENEQELRRKK FRVESQVENWIQKYDGDMNERQTEYEEIDALYTGEKKQLHELEERFKTLEAEYQQIMEERRVAREKREAAEREMASMVKA ATTIQAFWRSFKVRKALKARKKKGGGKKKNFSQILNENDHKWSTYCVNFKHRAILHRG |
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| Protein ID | pfu_aug2.0_554.1_14303.t2 |
| Definition | - |
>pfu_aug2.0_554.1_14303.t2 MAASNVMPAGMTTTETIGVEPTLHMKLQMPHPPNSKYPGPGGGMSKMRQKLRLDPSRALEPARKKIATIEAQRVMSVFED TITKTEIVTLLPFILENRERFRVSLGAELSLLLDIHKNTVDSYEEIKQQLDIQLRRNKEPSRAVPRSPNDLQSDIQDDTF HDTTGERGVTTEGEEMSPPASPNDGKATTTGRSSAGSNRSEVQSVMSYDSQTERTMRNLSLVAQQLSSSCKNILRAFSAN PNVLSMIKNQARRDPLSKGVCTQLNELKDILMNKLLTTPEEEKERMLYIQEISKRERHNAGIIDDLETKLKAAMDDKDDE IKKKNAVIRKLQADLRQIEKFSEENNKRVTNEAEKQESADLKNSDGKKQRLTQELNQLKTQLQNLIMEHRENEQELRRKK FRVESQVENWIQKYDGDMNERQTEYEEIDALYTGEKKQLHELEERFKTLEAEYQQIMEERRVAREKREAAEREMASMVKA ATTIQAFWRSFKVRKALKARKKKGGGKKKNFSQILNENDHKWSTYCVNFKHRAKCRSILHRG |
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