Gene
| Gene Model ID | pfu_aug2.0_554.1_14306 |
|---|---|
| Locus | scaffold554.1 : 238365 ... 248563 : - |
| To GenomeBrowser | scaffold554.1:238365..248563 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | pfu_aug1.0_19865.1_40186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_554.1_14306.t1 | 2 | 1 | DUF3469 | 18 | 75 | 7.9e-06 | 25.4 | 7.1e-10 | 1.1e-05 | 25.0 |
| pfu_aug2.0_554.1_14306.t1 | 2 | 2 | DUF3469 | 262 | 290 | 7.9e-06 | 25.4 | 0.085 | 1300.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_554.1_14306.t1 | gi|383847442|ref|XP_003699363.1| | 2.0e-07 | |
| pfu_aug2.0_554.1_14306.t1 | gi|350406768|ref|XP_003487875.1| | PREDICTED: NF-kappa-B-repressing factor [Bombus impatiens] | 7.0e-06 |
| pfu_aug2.0_554.1_14306.t1 | gi|380015779|ref|XP_003691873.1| | 8.0e-06 | |
| pfu_aug2.0_554.1_14306.t1 | gi|572312045|ref|XP_006621744.1| | PREDICTED: NF-kappa-B-repressing factor-like [Apis dorsata] | 9.0e-06 |
| pfu_aug2.0_554.1_14306.t1 | gi|328787110|ref|XP_395328.3| | PREDICTED: NF-kappa-B-repressing factor-like isoform 2 [Apis mellifera] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_554.1_14306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14306.t1 atggagaaagtggacaggaaggtcagtttgaagcctacatctgacgattccattgagaggctgaaaggcacgcaggaatc ttttggtttttggacacgtcgcaaacgatttctgaaagcttattgggggatgtttccacctaaggagcttgactgcctct cgtattgttatacaaatatcctaacttttggatgcagttattctgagcagaagatgacattgttggatttgcttgtgaga gacatggtttcagatatgatgtcaaagtcagaaaagaaagtagccaagacgatcaggaggctgtgggagaaaagaatgga ggaaatagaagacatgaaggagaacagaccattaagaacgcgaaacactgaaaataaggcaaagaatgaagaggaggaaa tcatcatcaataaggttcattctgctgaactgtgtcccactggacaaaggacaataggtagaggactatcatggttaagt ctcttcaatatctcagatttagacggaaaggagagtgagaaagcattgtcagagattcgagatgcaagcgcttggggaag aattaccaatgtggacagaagcaagcaatctgccttgcaaggtctgtctccaaatagtcagcatagaactgttcctacag gtaccacatccaaatatggattagcagacacaggacaaaaatgtcccgttaagagtggaaatgtgcaacaagtatcggcc aattcaggcaaaacaaatcagattctttatcagaatagagatatgacatatggtaagaagaaaaccacaccagaacggct tagagaagtgtcagagaaaattaaacatcttgaacaattgccaagtaaagagaagaaggaaagtatgaaacataatggaa ggtccaagttttctaaaagcaatgataaacaaagaaatgtgccaaaactatctgcagagaaaaggtcagaccataacaag ttcaaggggtttaattctgccctaaatatgttaaaaagtgctaaagagaaagtaaagcaggtggttgccgttttgggcag taataaaagtgagggaaaagtgctggaggtccctggacggtatattccaaagaagactgagggttttgagagtgaggagc tatatgacagagctgaaagccttgataaagaaatcactgatggtcatgtggagggaatagaaagtggtttggaagagaaa gatgatgaaaactcagactctgacctggaaagtagctgttcctgggagagtgtacagtcagacagtgatcagagtgtctg tgagaggaaccaaacatccatttctcatgtaagaagccagattactaaggagattcacagaaagcacaccatgactgtta cgggcagtaagcaagtgaagaagaaaacttcagtaccaacctataccgacttgttgagattttattacaagaaaggatct ggaaagaaggtagtcaaaaatggcaaggatgtgaaaaacaaaaactctgcggtaccgagtgtagctccaatttgtgaacc tgtaatcgacacccatgttgctgctgataatcagttgtttgatctggaggaacatcgcgggaagatccgtaattactccg atttactgaaggagcaatacatgtacaaaacagcagactggtataataacaacgaggaaactggttaccatggtgatttg ggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnntcagaggaagtcttcaccatccaatag |
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Protein
| Protein ID | pfu_aug2.0_554.1_14306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_554.1_14306.t1 MEKVDRKVSLKPTSDDSIERLKGTQESFGFWTRRKRFLKAYWGMFPPKELDCLSYCYTNILTFGCSYSEQKMTLLDLLVR DMVSDMMSKSEKKVAKTIRRLWEKRMEEIEDMKENRPLRTRNTENKAKNEEEEIIINKVHSAELCPTGQRTIGRGLSWLS LFNISDLDGKESEKALSEIRDASAWGRITNVDRSKQSALQGLSPNSQHRTVPTGTTSKYGLADTGQKCPVKSGNVQQVSA NSGKTNQILYQNRDMTYGKKKTTPERLREVSEKIKHLEQLPSKEKKESMKHNGRSKFSKSNDKQRNVPKLSAEKRSDHNK FKGFNSALNMLKSAKEKVKQVVAVLGSNKSEGKVLEVPGRYIPKKTEGFESEELYDRAESLDKEITDGHVEGIESGLEEK DDENSDSDLESSCSWESVQSDSDQSVCERNQTSISHVRSQITKEIHRKHTMTVTGSKQVKKKTSVPTYTDLLRFYYKKGS GKKVVKNGKDVKNKNSAVPSVAPICEPVIDTHVAADNQLFDLEEHRGKIRNYSDLLKEQYMYKTADWYNNNEETGYHGDL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEVFTIQ |
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