Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5549.1_32802
Locus scaffold5549.1 : 1 ... 9640 : +
To GenomeBrowser scaffold5549.1:1..9640
Genes list of scaffold scaffold5549.1
Synonym pfu_aug1.0_424.1_50857

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_5549.1_32802.t1 2 1 MFS_1 13 348 1.2e-15 57.1 1.6e-19 1.2e-15 57.1
pfu_aug2.0_5549.1_32802.t1 2 2 MFS_1 386 392 1.2e-15 57.1 0.52 3900.0 -3.8

Transcript
Transcript IDpfu_aug2.0_5549.1_32802.t1
Definition-
>pfu_aug2.0_5549.1_32802.t1
tcgaacttcagtcatctttgatcaatatcggtctaggatttggaatttttccgggactcttctatgatcggttcggacca
acaatggcatcgatgttaggcgttcttgtctcgatgacagcatacacattactttggagcacctcgaaaaaccaaatatt
ctactctcagtcaagcttgttgatggcaatgtatttctttttagcaggttttggatcggttttcacttacatggtagcat
taaacaccaatatcatcaactttgatgcgaaacatcgaagcaaaattgttggcctgcttaatgcttgcatagcgggaagt
ccatcaatattttcgattgtttattacagaatcttccaaactaacaattcggctgagagtttcggatcctttatgctgat
gttcgctgtatgttttgttttcactgacattatctgtatgttgtttttacgcctattcactactacaaaatcttccagta
ctgatattttaccagattttgatgaaatagaagaaactgaaatgaaagatatagatgaaatacgagactctcaatgttgc
acagaagaggaagaatcgggagccactgaacatatttctataggaacattattatcacaaatagactactggttatttct
ctgtctctttagcttttcgtccttagtaggattagtttatctcaataatctcactgtgataacaaaatcgaatggactat
catcacatgatcaggatatagttctaataatccctatcacaaatgcaatagtaagttcaggaacgggtgtagtctcagat
ctgatgaaagaaaaactaccgcgagtacatttcctcgttatggggtgtgtactattcaccggatgtgctatattggcaat
gatatggggagatgattttgctattctctgtgtagcaaccctgttatgtggtgcgggaatgggtttcatttggacacttg
gtcccacagttttgagtgaaatgctatatataggtgatattgggcggaactggggaatagcacttcttgtaagctcactt
ataggatgggcggtacaagaagcatttgggagtctatatgataatgaaactccactagggaaaacaaattgtacatatgg
aatgaaatgtgtacgaactggactcatgttattagtgatttctggctgtgtatcaattgcttgtggagttgctcttcttt
taaagcgaaacatcaatagatggtttgaatgttgtagaaaatga

Protein
Protein IDpfu_aug2.0_5549.1_32802.t1
Definition-
>pfu_aug2.0_5549.1_32802.t1
ELQSSLINIGLGFGIFPGLFYDRFGPTMASMLGVLVSMTAYTLLWSTSKNQIFYSQSSLLMAMYFFLAGFGSVFTYMVAL
NTNIINFDAKHRSKIVGLLNACIAGSPSIFSIVYYRIFQTNNSAESFGSFMLMFAVCFVFTDIICMLFLRLFTTTKSSST
DILPDFDEIEETEMKDIDEIRDSQCCTEEEESGATEHISIGTLLSQIDYWLFLCLFSFSSLVGLVYLNNLTVITKSNGLS
SHDQDIVLIIPITNAIVSSGTGVVSDLMKEKLPRVHFLVMGCVLFTGCAILAMIWGDDFAILCVATLLCGAGMGFIWTLG
PTVLSEMLYIGDIGRNWGIALLVSSLIGWAVQEAFGSLYDNETPLGKTNCTYGMKCVRTGLMLLVISGCVSIACGVALLL
KRNINRWFECCRK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495