Gene
| Gene Model ID | pfu_aug2.0_5549.1_32803 |
|---|---|
| Locus | scaffold5549.1 : 11136 ... 23703 : + |
| To GenomeBrowser | scaffold5549.1:11136..23703 |
| Genes list of scaffold | scaffold5549.1 |
| Synonym | pfu_aug1.0_424.1_50855 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5549.1_32803.t1 | 1 | 1 | Fibrinogen_C | 114 | 322 | 0.0 | 201.4 | 0.0 | 0.0 | 201.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5549.1_32803.t1 | gi|511963293|ref|XP_004799800.1| | 0.0 | |
| pfu_aug2.0_5549.1_32803.t1 | gi|671033707|ref|XP_008707673.1| | PREDICTED: ficolin-1-like isoform X6 [Ursus maritimus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5549.1_32803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5549.1_32803.t1 atgctagcaaggaggggatctccaacaacaccaggtttcaacaaccacagcaaaccacccaatgcaaaaccacagagcag acaagcacaggaagagacgcaaaagggagaaggaagagacgcaaaagggagaaggaagaaacgcaagagggacacggaag agacgcaaaagggacaaggaagagacgcaaaagggacaaataaattcttgaagaatggaaaaatgcagagaaactggcag ccagacggggcagttgctcagctatccggtccattgtcgctcaccctcaagtatagattcaaagtcccatttaaggaaga attcatttggacagatatttataaagattgtcacagtattaaggacacattgaagactctgcttgatgatggggtatata gaatccacgttaagggaatgaaacctaagaaagtatactgtgatatgactacagatggaggagggtggacggtttttcaa agacgaaaagacggcacagaagacttctacaggacatggactgagtacaaggaaggatttggacaagcaaaaggagaata ttggttgggaaactctgcattgcatgagatgacaaagaatggtacctgtgaactaaggattgacatgacgaactggaagg gcacaaaagggtatgcaaaatatcaaaatttcaagatcgcagcagaggcaagcaagtttcaacttcgaatagggaggtac tcaggcaccgcaggaaaggacagtcttgcatatcacaacaacgcgaaatttacaacaaaggacgcagataatgatacgta caagactaactgcgcaatcactcacgaaaagggagcgtggtggtacagagcgtgtgattattgtggattgaacggcctat acaatgtcacaaactcagacatgggcgttgaatgggatggatttccgaatggaaagtacatgaaaagcacgaaaatgatg tttagatgcaaataa |
|
Protein
| Protein ID | pfu_aug2.0_5549.1_32803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5549.1_32803.t1 MLARRGSPTTPGFNNHSKPPNAKPQSRQAQEETQKGEGRDAKGRRKKRKRDTEETQKGQGRDAKGTNKFLKNGKMQRNWQ PDGAVAQLSGPLSLTLKYRFKVPFKEEFIWTDIYKDCHSIKDTLKTLLDDGVYRIHVKGMKPKKVYCDMTTDGGGWTVFQ RRKDGTEDFYRTWTEYKEGFGQAKGEYWLGNSALHEMTKNGTCELRIDMTNWKGTKGYAKYQNFKIAAEASKFQLRIGRY SGTAGKDSLAYHNNAKFTTKDADNDTYKTNCAITHEKGAWWYRACDYCGLNGLYNVTNSDMGVEWDGFPNGKYMKSTKMM FRCK |
|