Gene
| Gene Model ID | pfu_aug2.0_556.1_20903 |
|---|---|
| Locus | scaffold556.1 : 106134 ... 114655 : - |
| To GenomeBrowser | scaffold556.1:106134..114655 |
| Genes list of scaffold | scaffold556.1 |
| Synonym | pfu_aug1.0_83866.1_13298 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kinesin-like protein | GO:0000280 GO:0000911 GO:0003777 GO:0005524 GO:0005737 GO:0005871 GO:0005874 GO:0006270 GO:0006275 GO:0006306 GO:0006346 GO:0007018 GO:0008017 GO:0008283 GO:0009909 GO:0010389 GO:0016572 GO:0016887 GO:0031048 GO:0042023 GO:0048449 GO:0051225 GO:0051567 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_556.1_20903.t1 | 3 | 1 | Kinesin | 9 | 28 | 0.0 | 160.4 | 0.17 | 1300.0 | -2.3 |
| pfu_aug2.0_556.1_20903.t1 | 3 | 2 | Kinesin | 47 | 86 | 0.0 | 160.4 | 7.3e-16 | 5.4e-12 | 45.0 |
| pfu_aug2.0_556.1_20903.t1 | 3 | 3 | Kinesin | 133 | 244 | 0.0 | 160.4 | 7.4e-38 | 5.5e-34 | 117.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_556.1_20903.t1 | gi|18406379|ref|NP_564744.1| | kinesin-like protein [Arabidopsis thaliana] | 6.0e-34 |
| pfu_aug2.0_556.1_20903.t1 | gi|302796201|ref|XP_002979863.1| | hypothetical protein SELMODRAFT_111677 [Selaginella moellendorffii] | 7.0e-34 |
| pfu_aug2.0_556.1_20903.t1 | gi|302813493|ref|XP_002988432.1| | hypothetical protein SELMODRAFT_127882 [Selaginella moellendorffii] | 7.0e-34 |
| pfu_aug2.0_556.1_20903.t1 | gi|727594401|ref|XP_010470224.1| | PREDICTED: centromere-associated protein E-like [Camelina sativa] | 7.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_556.1_20903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_556.1_20903.t1 atggacaacatcaaagtggctgtgagggtcagacctcttattgagaaggagagaggtcagaataacaactggatcaccaa agaaaatactatatcagctgtggatggcaatggcaagacaggaaatccttacttgtttggtactatatttgcctacggac aaagctcttctggaaagacgttcacaatgtccgggtctccattacatccaggaattgtacctcaggccatagcggatata tttgagaagatcaacagtatggtaggcatttcatatttcttacaaacattcgccacaaagaatactacagttggaattat gactttagaccttgtgaccttgaccttgactttgggtttatgttgcaatttaggcttagaagatttgaaagcagatttct tgtatgttataaatggtactatatttgcctacggacaaagctcttctggaaagacgttcacaatgtccgggtctccatta cacccaggaatcgtacctcaggccatagcggatatatttgagaagatcaacagtatatcagaccgtgaattcctggtcag gatatcgtacatggagatttataatgagaaagtttccgatcttcttgaccaagaggacaaggtcattcgtatacaggaag atgtggacaaaaacatcactgtgagtggactgaaagaagaaatggtcaaagacatggagagtgtattacaactcatcaaa gctggagagagtatgtatgaaatcttgttcttgctctag |
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Protein
| Protein ID | pfu_aug2.0_556.1_20903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_556.1_20903.t1 MDNIKVAVRVRPLIEKERGQNNNWITKENTISAVDGNGKTGNPYLFGTIFAYGQSSSGKTFTMSGSPLHPGIVPQAIADI FEKINSMVGISYFLQTFATKNTTVGIMTLDLVTLTLTLGLCCNLGLEDLKADFLYVINGTIFAYGQSSSGKTFTMSGSPL HPGIVPQAIADIFEKINSISDREFLVRISYMEIYNEKVSDLLDQEDKVIRIQEDVDKNITVSGLKEEMVKDMESVLQLIK AGESMYEILFLL |
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