Gene
| Gene Model ID | pfu_aug2.0_5560.1_02758 |
|---|---|
| Locus | scaffold5560.1 : 9833 ... 15015 : - |
| To GenomeBrowser | scaffold5560.1:9833..15015 |
| Genes list of scaffold | scaffold5560.1 |
| Synonym | pfu_aug1.0_11743.1_53731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5560.1_02758.t1 | 1 | 1 | gag-asp_proteas | 296 | 335 | 1.6e-06 | 27.8 | 1.6e-09 | 3.0e-06 | 26.9 |
| pfu_aug2.0_5560.1_02758.t1 | 1 | 1 | RVP | 300 | 357 | 2.6e-06 | 27.2 | 4.7e-09 | 8.7e-06 | 25.5 |
| pfu_aug2.0_5560.1_02758.t1 | 1 | 1 | Asp_protease_2 | 306 | 355 | 8.0e-07 | 29.4 | 1.0e-09 | 1.9e-06 | 28.2 |
| pfu_aug2.0_5560.1_02758.t1 | 2 | 1 | RVT_1 | 490 | 637 | 2.0e-08 | 33.8 | 3.9e-11 | 7.1e-08 | 32.0 |
| pfu_aug2.0_5560.1_02758.t1 | 2 | 2 | RVT_1 | 810 | 829 | 2.0e-08 | 33.8 | 3.6 | 6800.0 | -3.9 |
| pfu_aug2.0_5560.1_02758.t1 | 1 | 1 | rve | 1006 | 1107 | 2.5e-15 | 56.6 | 4.9e-18 | 9.1e-15 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5560.1_02758.t1 | gi|291235382|ref|XP_002737623.1| | PREDICTED: uncharacterized protein K02A2.6-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_5560.1_02758.t1 | gi|291240505|ref|XP_002740159.1| | PREDICTED: uncharacterized protein K02A2.6-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_5560.1_02758.t1 | gi|390368332|ref|XP_003731432.1| | PREDICTED: uncharacterized protein K02A2.6-like, partial [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_5560.1_02758.t1 | gi|390332420|ref|XP_003723494.1| | PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_5560.1_02758.t1 | gi|390332424|ref|XP_003723496.1| | PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5560.1_02758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5560.1_02758.t1 atggcagaagggttcaatctcccgaatttccccgctttagacccggacgtggacaaaagtaatgcatgtgttcgctggga aaaatggatgggtcgactggaaaatctatttgtaggcctaaacatcgaagatgatgacagaaaaagggctctactgctcc actatgcaggtgagagagtgtacgacatttatgacaccgaaaagggcgattcagaaaccacattttctgctacaaaagac gttttgaagacgtacttcgacccgaaacgtaacattcagatggaaatattcaacttcagagactataaacaaaaggaagg gcaaacccttgacgaatttgtgacagagctcagacgccttgcaagagactgcgaatttgcaaacataaacaatgaaattt tgtcccaagtcatccaaaactgcagatcgacgcgtcttcggaggagggaactccgcgaacctgggaaaagccttgaagac atactaaagcttggtcgtacgcttgaaatgaccgacacacatgcagcaacgatggagggaaacaaagcgcagtccgattc ggtaaacaaactaaaatttgacaggaaaccgcagaattatccgcaacgaaggcaccgccacagagaacaaaacaggtctg agaatcacggagaccgtataccggttaagaaatgtcacaactgcggagggaaataccggcacactggcgagtgtccagct aaagggaaaatatgccttaagtgtgagaaggaaaatcactttgctaaggtatgtcgtagcaagcctagacgtaaacaaaa gaaacaagttaacgagctacaagcaaatgacacgtacacagagtcaagtgaagaatacatttatagcattacagagcaca aagtcaacgcaataagctcaaagctaccaatggcgaaagtcaggatcaataataaagattgcaaatttctcatagatact ggggctacagttaacatcctcgacgagaagacttaccaatcagtaggtacacctagactccagaggaaaaatcgacaaaa actacaaccatatggaggaggacgctcacttcatatccttggaacgtgtaaattaggagtcgaatctaaagagaaattcg aatgtcacaccttctctgtggtcaaggggaaccatggtgctatcttcggtttcgaaacagcaccacaactctatcttgtg aaaatagtgcaacagataaaacctgctacgcttgaagttgagcacaaatatgcacacctatttgaaggtataggaagata caagaagggcaagatcaagctccacatagatgaaaacataaaacctgttgcacagaggtacagacgaacaccctttcact taagatcaaaagttgagaaggagatagaaaaactgataaaggaggatatcatagagaatgtaacacagggccgtcctacg ccatgggtctcgcctatcgtaacgccgccaaagaaaaacccggatgaaatccgactctgcgtagacatgcgagaagcaaa caaagccatattgcgagaaagacatgttctaccaacaatcgacgagctaatttatgatctaaacaatgctagcgaattca gcaaactggatctacgagcgggctatcaccaaatggaacttgaggaggaatcaaagcatattacaactttcagtacacat ttgggtctgtacagatataagaggctaaatttcgggatatcgtcagcatccgagatcttcaaggaaacgataagaagtgt tatacgagacgtccaaggcgcggaaaatctctcggacgatataatcatctatggaaaaacccagaaggaccatgatcgat ctcttgaagctgtatttcaagcactacaagaaagtggcctcactctaaacaaggaaaatgacggcatatcaccagaccct aagaaagtgcgagcaataaaggaagcagctccgccaactaactcatctgaattgcgcagcttcctgggtatgacaaatta ttcagcacgcttcatcccagataatgcgacgatctgcgaaccgttgcgccgactcacgaaacaagacaacgagtgggaat ggggtgtcgaacaagatcgggcttttgaaagactaaagtcagaactttctagtgataccattatcacatattacaaccca gaatcagaaatcagcattctagttgatgcaagccccgtgggcttaggagcaattatggcacaggatgaaaaagtcgttgc atatgctagccgtgctctaaccgatgttgagagccgctatagtcaaactgagagagaagccctagcgattgtatgggcgt gtgaacattttgacatgtacatccgcggagctccttgcgttaacattgtgaccgaccacaaaccactcgagacaatatgg cagaaaccgaaaccgccgcttagaatagaaagatggggactccgtttacagccgtataaactgaaaataagatatgaacc aggtcacagtaatccagctgattatatgtcacgtcatccgtgcgcaacgaagaaaaactctcatgaggagaagattgcag agagctacgtaaacttcatcactacaggatccgatccgaaggccatgaccttagatgaagttaaatctgcatccaatgag gataaaactattcagaaagctatagaattcgcgggcaatggcaaatggcacgaaataaagaacaataccgacactgaaat cgacatcgcagaactacaggcctatcggaatattcgcaatgaactcgtagttcactctgaaaacatattgttgcgggacc ataggattgtaatgccttacaaacttcgtaagactgcgatacatattgcacacgagggtcaccaaggccttaccaagact aaagcctttatccggtccaaaatatggttcccgggaattaacgacgaggtggactccgtgatcaaggattgcgctgcttg ccaaataaatacaccggctcgatatatggaaccattacatatgtccgaactacccgctcacccatgggacaacctaagta tggacttctgcggaccgctcccgtcgggtgattacttatttgtcatcatcgacgagtattcacgatatcctgttgtagag attatcctatctctatccgctcacactgttatcccatacatactgtcagaattcggaattccaagcatggttaagtctga caatcgagcacccttcaactcgcatgcttttaaggaattcgcacaaaacatgggcttcaaacaccgaaagattacgccgc tctggacgagggccaacgcgcaagccgaagcgttcaataaaccgcacatgaaagctgtaaaatcagtccatattgaggga aggagctggaagcaggaaatgtttcgtttccttcgacagtacagagcaacgcctcatacatcaactgcgtttacgccaca cagactcctatttggacgcgaaccgtctaccaaagtacaacggaagaacacacaaaattcggaaataacagaaaaggtcc ggcaaaatgacgaacaatcaaaggcaaagatgaaaaacgccgcagacaagcgcaatcatgcgagtaagtcggaactgaat cgaggcgatcatgttctcatacgcaacgaacgcaaagggaacaaactgacaccgacgtacaaccctgaatcgcttactgt cacaaggaagaaggggagcatgataacagcaactgatggaaataaggaaatcatcagaaatgcgtccgtaatgaagaaaa cgaccgttacacctgaatcatgcattaccccgcaagaggaagaagaagaagaggaagaaatcgctatagacactgggccg tcaacatcacccaacactccagttaatcgtccaaagagaatatctaaaccgccatcctatctgcaggattatgtgcgttt ttag |
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Protein
| Protein ID | pfu_aug2.0_5560.1_02758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5560.1_02758.t1 MAEGFNLPNFPALDPDVDKSNACVRWEKWMGRLENLFVGLNIEDDDRKRALLLHYAGERVYDIYDTEKGDSETTFSATKD VLKTYFDPKRNIQMEIFNFRDYKQKEGQTLDEFVTELRRLARDCEFANINNEILSQVIQNCRSTRLRRRELREPGKSLED ILKLGRTLEMTDTHAATMEGNKAQSDSVNKLKFDRKPQNYPQRRHRHREQNRSENHGDRIPVKKCHNCGGKYRHTGECPA KGKICLKCEKENHFAKVCRSKPRRKQKKQVNELQANDTYTESSEEYIYSITEHKVNAISSKLPMAKVRINNKDCKFLIDT GATVNILDEKTYQSVGTPRLQRKNRQKLQPYGGGRSLHILGTCKLGVESKEKFECHTFSVVKGNHGAIFGFETAPQLYLV KIVQQIKPATLEVEHKYAHLFEGIGRYKKGKIKLHIDENIKPVAQRYRRTPFHLRSKVEKEIEKLIKEDIIENVTQGRPT PWVSPIVTPPKKNPDEIRLCVDMREANKAILRERHVLPTIDELIYDLNNASEFSKLDLRAGYHQMELEEESKHITTFSTH LGLYRYKRLNFGISSASEIFKETIRSVIRDVQGAENLSDDIIIYGKTQKDHDRSLEAVFQALQESGLTLNKENDGISPDP KKVRAIKEAAPPTNSSELRSFLGMTNYSARFIPDNATICEPLRRLTKQDNEWEWGVEQDRAFERLKSELSSDTIITYYNP ESEISILVDASPVGLGAIMAQDEKVVAYASRALTDVESRYSQTEREALAIVWACEHFDMYIRGAPCVNIVTDHKPLETIW QKPKPPLRIERWGLRLQPYKLKIRYEPGHSNPADYMSRHPCATKKNSHEEKIAESYVNFITTGSDPKAMTLDEVKSASNE DKTIQKAIEFAGNGKWHEIKNNTDTEIDIAELQAYRNIRNELVVHSENILLRDHRIVMPYKLRKTAIHIAHEGHQGLTKT KAFIRSKIWFPGINDEVDSVIKDCAACQINTPARYMEPLHMSELPAHPWDNLSMDFCGPLPSGDYLFVIIDEYSRYPVVE IILSLSAHTVIPYILSEFGIPSMVKSDNRAPFNSHAFKEFAQNMGFKHRKITPLWTRANAQAEAFNKPHMKAVKSVHIEG RSWKQEMFRFLRQYRATPHTSTAFTPHRLLFGREPSTKVQRKNTQNSEITEKVRQNDEQSKAKMKNAADKRNHASKSELN RGDHVLIRNERKGNKLTPTYNPESLTVTRKKGSMITATDGNKEIIRNASVMKKTTVTPESCITPQEEEEEEEEIAIDTGP STSPNTPVNRPKRISKPPSYLQDYVRF |
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