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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5561.1_06136
Locus scaffold5561.1 : 14852 ... 26845 : -
To GenomeBrowser scaffold5561.1:14852..26845
Genes list of scaffold scaffold5561.1
Synonym pfu_aug1.0_10158.1_39005

Manual annotation
Annotation by Blast2GO
Annotation GO
n-acetylgalactosamine kinase GO:0004335 GO:0005524 GO:0005737 GO:0006012 GO:0046835

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_5561.1_06136.t1 1 1 GalKase_gal_bdg 1 26 1.3e-09 37.1 1.2e-12 2.5e-09 36.2
pfu_aug2.0_5561.1_06136.t1 2 1 GHMP_kinases_N 86 149 2.8e-13 49.7 3.4e-16 7.2e-13 48.4
pfu_aug2.0_5561.1_06136.t1 1 1 GHMP_kinases_C 312 382 6.3e-11 42.3 1.1e-13 2.3e-10 40.5
pfu_aug2.0_5561.1_06136.t1 2 2 GHMP_kinases_N 334 346 2.8e-13 49.7 4.0 8400.0 -3.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_5561.1_06136.t1 gi|676463680|ref|XP_009056674.1| hypothetical protein LOTGIDRAFT_206567 [Lottia gigantea] 0.0
pfu_aug2.0_5561.1_06136.t1 gi|699647174|ref|XP_009895558.1| PREDICTED: N-acetylgalactosamine kinase [Picoides pubescens] 0.0
pfu_aug2.0_5561.1_06136.t1 gi|699581320|ref|XP_009862955.1| PREDICTED: N-acetylgalactosamine kinase [Apaloderma vittatum] 0.0
pfu_aug2.0_5561.1_06136.t1 gi|694853911|ref|XP_009468398.1| PREDICTED: N-acetylgalactosamine kinase isoform X1 [Nipponia nippon] 0.0
pfu_aug2.0_5561.1_06136.t1 gi|694853913|ref|XP_009468399.1| PREDICTED: N-acetylgalactosamine kinase isoform X2 [Nipponia nippon] 0.0

Transcript
Transcript IDpfu_aug2.0_5561.1_06136.t1
Definition-
>pfu_aug2.0_5561.1_06136.t1
gggagcatatagactattgtggatactctgtccttccgatggcaatagagcaagatgtcattatagctgtcagtaaaaat
gactcgggggacgtcaatttgggcaatacaaaccaagagctttatagggatttcacgtgtaaagtggacaatttcagtat
caatagatcagatccacagtggcataactacttcctatgtggattatgtggcatgctggaacacctgaagctggagtctg
gggtggggatgaactgtatggtggatggtacagtcccacccagctctggactgtccagctctagtgccatggtctgctgt
gcagctctggccaccatgtatgttaatggacattgtatgcaaaagagtgagatagctgatatgtgtgctcactgtgaaca
ctatataggcacagagggaggtggtatggaccaagctatctccttcatggctaaacaaggaactgccaagctgatagaat
tcaatccccttagagccacagatgtagtgctaccagatggcgctgtttttgttatatctaatagctgcgtagagtccaat
aaagcagctgctagtcatttcaacatcagagttgtggagtgtcggttagctactcaaattttagcaaaatccaagggatt
gaattggagagactataagaggttagccgatgtgcagaaagcgctgaaactcacgttagaggaggcactggaggtagtga
gagaggtgctacatgaggaaccttataccaaggaggaggtggctcagatactgggagtatccaaagaggagttagccaat
acaagtcttagtgcaaacacactagatgtgcaatcattcaaagtaagagacagagcctgtcatgtgtttagtgaagctaa
tcgtgtgctgcagttcaagaaaatctgtgatacctcaccagcggatgccaaggatcagctaggacggctgatgtctgcta
gtcacgctagttgtcgagatctgtacgagtgcagccatccagatctggatagactagtcaacatctgtattgaagcagga
gctttaggatcaagattgactggtgctggatggggtggctgtgcagtttccatggtaccaaccaatcaagtacaagcttt
catcaagacagtgaaggaaaaatactatgatgctgacccaaacagatcaaccaaagttacctcctctttgtttgcctctc
agccaggtggtggagctgccatttacatacaatcacaaatatcagactga

Protein
Protein IDpfu_aug2.0_5561.1_06136.t1
Definition-
>pfu_aug2.0_5561.1_06136.t1
EHIDYCGYSVLPMAIEQDVIIAVSKNDSGDVNLGNTNQELYRDFTCKVDNFSINRSDPQWHNYFLCGLCGMLEHLKLESG
VGMNCMVDGTVPPSSGLSSSSAMVCCAALATMYVNGHCMQKSEIADMCAHCEHYIGTEGGGMDQAISFMAKQGTAKLIEF
NPLRATDVVLPDGAVFVISNSCVESNKAAASHFNIRVVECRLATQILAKSKGLNWRDYKRLADVQKALKLTLEEALEVVR
EVLHEEPYTKEEVAQILGVSKEELANTSLSANTLDVQSFKVRDRACHVFSEANRVLQFKKICDTSPADAKDQLGRLMSAS
HASCRDLYECSHPDLDRLVNICIEAGALGSRLTGAGWGGCAVSMVPTNQVQAFIKTVKEKYYDADPNRSTKVTSSLFASQ
PGGGAAIYIQSQISD

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