Gene
| Gene Model ID | pfu_aug2.0_5561.1_06136 |
|---|---|
| Locus | scaffold5561.1 : 14852 ... 26845 : - |
| To GenomeBrowser | scaffold5561.1:14852..26845 |
| Genes list of scaffold | scaffold5561.1 |
| Synonym | pfu_aug1.0_10158.1_39005 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-acetylgalactosamine kinase | GO:0004335 GO:0005524 GO:0005737 GO:0006012 GO:0046835 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5561.1_06136.t1 | 1 | 1 | GalKase_gal_bdg | 1 | 26 | 1.3e-09 | 37.1 | 1.2e-12 | 2.5e-09 | 36.2 |
| pfu_aug2.0_5561.1_06136.t1 | 2 | 1 | GHMP_kinases_N | 86 | 149 | 2.8e-13 | 49.7 | 3.4e-16 | 7.2e-13 | 48.4 |
| pfu_aug2.0_5561.1_06136.t1 | 1 | 1 | GHMP_kinases_C | 312 | 382 | 6.3e-11 | 42.3 | 1.1e-13 | 2.3e-10 | 40.5 |
| pfu_aug2.0_5561.1_06136.t1 | 2 | 2 | GHMP_kinases_N | 334 | 346 | 2.8e-13 | 49.7 | 4.0 | 8400.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5561.1_06136.t1 | gi|676463680|ref|XP_009056674.1| | hypothetical protein LOTGIDRAFT_206567 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5561.1_06136.t1 | gi|699647174|ref|XP_009895558.1| | PREDICTED: N-acetylgalactosamine kinase [Picoides pubescens] | 0.0 |
| pfu_aug2.0_5561.1_06136.t1 | gi|699581320|ref|XP_009862955.1| | PREDICTED: N-acetylgalactosamine kinase [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_5561.1_06136.t1 | gi|694853911|ref|XP_009468398.1| | PREDICTED: N-acetylgalactosamine kinase isoform X1 [Nipponia nippon] | 0.0 |
| pfu_aug2.0_5561.1_06136.t1 | gi|694853913|ref|XP_009468399.1| | PREDICTED: N-acetylgalactosamine kinase isoform X2 [Nipponia nippon] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5561.1_06136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5561.1_06136.t1 gggagcatatagactattgtggatactctgtccttccgatggcaatagagcaagatgtcattatagctgtcagtaaaaat gactcgggggacgtcaatttgggcaatacaaaccaagagctttatagggatttcacgtgtaaagtggacaatttcagtat caatagatcagatccacagtggcataactacttcctatgtggattatgtggcatgctggaacacctgaagctggagtctg gggtggggatgaactgtatggtggatggtacagtcccacccagctctggactgtccagctctagtgccatggtctgctgt gcagctctggccaccatgtatgttaatggacattgtatgcaaaagagtgagatagctgatatgtgtgctcactgtgaaca ctatataggcacagagggaggtggtatggaccaagctatctccttcatggctaaacaaggaactgccaagctgatagaat tcaatccccttagagccacagatgtagtgctaccagatggcgctgtttttgttatatctaatagctgcgtagagtccaat aaagcagctgctagtcatttcaacatcagagttgtggagtgtcggttagctactcaaattttagcaaaatccaagggatt gaattggagagactataagaggttagccgatgtgcagaaagcgctgaaactcacgttagaggaggcactggaggtagtga gagaggtgctacatgaggaaccttataccaaggaggaggtggctcagatactgggagtatccaaagaggagttagccaat acaagtcttagtgcaaacacactagatgtgcaatcattcaaagtaagagacagagcctgtcatgtgtttagtgaagctaa tcgtgtgctgcagttcaagaaaatctgtgatacctcaccagcggatgccaaggatcagctaggacggctgatgtctgcta gtcacgctagttgtcgagatctgtacgagtgcagccatccagatctggatagactagtcaacatctgtattgaagcagga gctttaggatcaagattgactggtgctggatggggtggctgtgcagtttccatggtaccaaccaatcaagtacaagcttt catcaagacagtgaaggaaaaatactatgatgctgacccaaacagatcaaccaaagttacctcctctttgtttgcctctc agccaggtggtggagctgccatttacatacaatcacaaatatcagactga |
|
Protein
| Protein ID | pfu_aug2.0_5561.1_06136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5561.1_06136.t1 EHIDYCGYSVLPMAIEQDVIIAVSKNDSGDVNLGNTNQELYRDFTCKVDNFSINRSDPQWHNYFLCGLCGMLEHLKLESG VGMNCMVDGTVPPSSGLSSSSAMVCCAALATMYVNGHCMQKSEIADMCAHCEHYIGTEGGGMDQAISFMAKQGTAKLIEF NPLRATDVVLPDGAVFVISNSCVESNKAAASHFNIRVVECRLATQILAKSKGLNWRDYKRLADVQKALKLTLEEALEVVR EVLHEEPYTKEEVAQILGVSKEELANTSLSANTLDVQSFKVRDRACHVFSEANRVLQFKKICDTSPADAKDQLGRLMSAS HASCRDLYECSHPDLDRLVNICIEAGALGSRLTGAGWGGCAVSMVPTNQVQAFIKTVKEKYYDADPNRSTKVTSSLFASQ PGGGAAIYIQSQISD |
|