Gene
| Gene Model ID | pfu_aug2.0_557.1_24181 |
|---|---|
| Locus | scaffold557.1 : 259796 ... 268131 : - |
| To GenomeBrowser | scaffold557.1:259796..268131 |
| Genes list of scaffold | scaffold557.1 |
| Synonym | pfu_aug1.0_2275.1_37257 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_557.1_24181.t1 | 1 | 1 | Carboxyl_trans | 92 | 557 | 0.0 | 346.6 | 0.0 | 0.0 | 346.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_557.1_24181.t1 | gi|676436564|ref|XP_009047924.1| | hypothetical protein LOTGIDRAFT_111576 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_557.1_24181.t1 | gi|514757771|ref|XP_005022391.1| | PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_557.1_24181.t1 | gi|694655657|ref|XP_009483839.1| | PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_557.1_24181.t1 | gi|637341903|ref|XP_008116637.1| | PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_557.1_24181.t1 | gi|541967814|ref|XP_005438325.1| | PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Falco cherrug] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_557.1_24181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_557.1_24181.t1 atggaaatagttaaaagactttttatacaacagcatgctgtattgagatttactcaggtgtcagtttgtaaatctagata ctctaatcaattgcatacaagtgtatcaaaagacagaaagaaaccttttagagtattggatgctggacttcttaaagatt cagaatatgagaaaaattatctgcgcaatgttaagttgacagaaaaatgtgcaagtgttgaaaaaatagcaaagggtggc ggaggcgaaaaagcaattttacgacatacagttaaacagaagaagcttttggttcaagatagacttcaattacttttaga tgatgattctgacttctttgaattatcgttaactgcaggactaggaatggagtatggagatgtaccaagagcaggaatga taacaggtataggcaaaatccatgggaggttgtgtttaatagttgctaatgatgcaactgttaaaggaggaacagtctat cctattactttgaaaaaacatctgcgtgcacaagagatagcagaagaaaacaatctgcccactgtttatgttgtggaatc tggtggaggcttccttccattgcaggccgagattttcctgcctggaggaagaactttctataatgaagctgtgatgtcat cccaaggaattcctcagatagcgatagtgtgtggtaactgtacggcagggggagcatacatacctatgatggcagatgaa gctgtgatgatcaagcagcagggatacatattccttggaggtcctccactagtgcaggcagctacaggggagattatcag tgcagaggagcttggaggagcaaaacttcactgcagtgtgagtggttgttctgactactttgcggaggatgaagaggaag cgtttattatgggtcgtgacatcgctgctacactcccccttcaccaatactgtacaggacctgctgaggagccattgtat gatacacaagaaatgcttggacttatatcacctcataacgatatagatgtttacaaggttatagccagagttgttgatgg gagcagattccatgagttcaagacaaagtttggatcaagccttgtcactggatttggttatatccagaactgcttggttg gaatagttgggaataacggtacaatcacagaatctgccgcagataagggagctcactttgtacagatgtgttgtgaacgt gacattcctatagtatttctgatgaacacgaaacattgtgaagagcaagttaatcatggaattacgggaggaaacatggc gagagcccatgccaagatgatatctgccgtcagttgttctaccgtccctcgtataacaatcatcataggcaatgctatag gacatcagagctacctcatgagtgggagatggaccagtcctaattttctgttttgttggcccaatgctgtgataggaatg acacatccacaggaggctatccagggtttatatcaggctaagtcacagactgttttatcagatgaagatcgcgagaagct tcaccagcagatcacagagaggtgtacggtagaatcgtcagctttctacgcagcttcacgtgtctggaacgatggaatta tactaccacaaaacactagacaggtgataggacagtgccttgatattgtgatggcctacagacgaaaattagaaaccaaa tctgctgttatcagaatgtga |
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Protein
| Protein ID | pfu_aug2.0_557.1_24181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_557.1_24181.t1 MEIVKRLFIQQHAVLRFTQVSVCKSRYSNQLHTSVSKDRKKPFRVLDAGLLKDSEYEKNYLRNVKLTEKCASVEKIAKGG GGEKAILRHTVKQKKLLVQDRLQLLLDDDSDFFELSLTAGLGMEYGDVPRAGMITGIGKIHGRLCLIVANDATVKGGTVY PITLKKHLRAQEIAEENNLPTVYVVESGGGFLPLQAEIFLPGGRTFYNEAVMSSQGIPQIAIVCGNCTAGGAYIPMMADE AVMIKQQGYIFLGGPPLVQAATGEIISAEELGGAKLHCSVSGCSDYFAEDEEEAFIMGRDIAATLPLHQYCTGPAEEPLY DTQEMLGLISPHNDIDVYKVIARVVDGSRFHEFKTKFGSSLVTGFGYIQNCLVGIVGNNGTITESAADKGAHFVQMCCER DIPIVFLMNTKHCEEQVNHGITGGNMARAHAKMISAVSCSTVPRITIIIGNAIGHQSYLMSGRWTSPNFLFCWPNAVIGM THPQEAIQGLYQAKSQTVLSDEDREKLHQQITERCTVESSAFYAASRVWNDGIILPQNTRQVIGQCLDIVMAYRRKLETK SAVIRM |
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