Gene
| Gene Model ID | pfu_aug2.0_5595.1_19447 |
|---|---|
| Locus | scaffold5595.1 : 10814 ... 19369 : + |
| To GenomeBrowser | scaffold5595.1:10814..19369 |
| Genes list of scaffold | scaffold5595.1 |
| Synonym | pfu_aug1.0_3244.1_44625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5595.1_19447.t2 | 1 | 1 | UPF0172 | 19 | 118 | 2.2e-18 | 66.4 | 3.7e-21 | 2.7e-17 | 62.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5595.1_19447.t2 | gi|240952134|ref|XP_002399318.1| | COX4 neighbor protein, putative [Ixodes scapularis] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_5595.1_19447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5595.1_19447.t1 atggcggacattgaagtgagcatccaggcttactgtaaattattactccatgctgccaagtatcctcattgtgctgtgaa tggaatacttctagctaaagataacaaatcaagtgacaataaaaccatcaaatttgtagactgtatacccctatttcaca tcacacttggtttgtctccgatgctggaggcagccttacttcagatagacacatactgccgaagtataggatgtgataaa gagatgaacaatatagccaaaataataggtaaaagaatacaagaaaataacaacagcaatgcatgtgtgttcatgattga taatgagcgggtctcacctaactccacaatggaagtgtatcgtgtgcatatacccaaagatacagcgtggaacgtagata aaagacaaacagtcgaagaggaaacgttacgagtagcttccgtactattatcatcagatgcatgtaaacagctcgtagat tttgactgtcacctcgatgatgtttctaaagactggaggaacatagacttgaatgacatgatagcaaaatgtacctga |
|
| Transcript ID | pfu_aug2.0_5595.1_19447.t2 |
| Definition | - |
>pfu_aug2.0_5595.1_19447.t2 atgctggaggcagccttacttcagatagacacatactgccgaagtataggatgtgataaagagatgaacaatatagccaa aataataggtaaaagaatacaagaaaataacaacagcaatgcatgtgtgttcatgattgataatgagcgggtctcaccta actccacaatggaagtgtatcgtgtgcatatacccaaagatacagcgtggaacgtagataaaagacaaacagtcgaagag gaaacgttacgagtagcttccgtactattatcatcagatgcatgtaaacagctcgtagattttgactgtcacctcgatga tgtttctaaagactggaggaacatagacttgaatgacatgatagcaaaatgtacctga |
|
Protein
| Protein ID | pfu_aug2.0_5595.1_19447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5595.1_19447.t1 MADIEVSIQAYCKLLLHAAKYPHCAVNGILLAKDNKSSDNKTIKFVDCIPLFHITLGLSPMLEAALLQIDTYCRSIGCDK EMNNIAKIIGKRIQENNNSNACVFMIDNERVSPNSTMEVYRVHIPKDTAWNVDKRQTVEEETLRVASVLLSSDACKQLVD FDCHLDDVSKDWRNIDLNDMIAKCT |
|
| Protein ID | pfu_aug2.0_5595.1_19447.t2 |
| Definition | - |
>pfu_aug2.0_5595.1_19447.t2 MLEAALLQIDTYCRSIGCDKEMNNIAKIIGKRIQENNNSNACVFMIDNERVSPNSTMEVYRVHIPKDTAWNVDKRQTVEE ETLRVASVLLSSDACKQLVDFDCHLDDVSKDWRNIDLNDMIAKCT |
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