Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5598.1_29448
Locus scaffold5598.1 : 3676 ... 26377 : +
To GenomeBrowser scaffold5598.1:3676..26377
Genes list of scaffold scaffold5598.1
Synonym pfu_aug1.0_26261.1_11763

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_5598.1_29448.t1 gi|632948489|ref|XP_007889625.1| PREDICTED: kazal-type serine protease inhibitor domain-containing protein 1-like [Callorhinchus milii] 2.0e-29
pfu_aug2.0_5598.1_29448.t1 gi|597788486|ref|XP_007257658.1| PREDICTED: kazal-type serine protease inhibitor domain-containing protein 1-like [Astyanax mexicanus] 6.0e-28

Transcript
Transcript IDpfu_aug2.0_5598.1_29448.t1
Definition-
>pfu_aug2.0_5598.1_29448.t1
atggaaattgatgtccgtttcttgatttctctgcttctgattagctccgcaatttgccaaaagagtgaccccgtggacgg
taactgtggagaatgcgacaccagtaaatgccccgtgaaagacaatacagaatgcgtcgccggattcacgaaagacaaat
gtgactgttgtcaactttgtgctaaacccgagggtgacttttgcgacctacccggcgaagtgcaccagtacggaaattgt
ggcgcgcatttgaactgtgtgaaacaaacaacagggacgggtatctgcgtttgtgaaaatcaggatgtcgtctgcggatc
aaacgatcaggagtacaagacgatctgtaaactgagagaggacaaaattcggaccggcaacgaggacttgatcgtagctt
atgtggggccgtgcaaagcagcccctgtgataatctccgggccagacagcgtccgcaatctgacaggcgatgacgtagta
ctactgtgtgaagcttacggtaatcccgtcccctcactcagctggaaattcagacgtgtggacggacaaatcgtgtcctt
accaggtaagtatgtctgtgtgaagcntggaaattcagacgtgtggacggacaaatcgtgtccttaccaggatgcctcac
caaatggcagttctcagcccattcctactacttcatcctcccagtttgtacttccagtctctacccctccccgatcagga
atcctcaatcccattgcgcaagaaaatgcaccccaggtaaatccaaatgttgaccaggagatgcttcaagccagagtagc
tgctaccagcaatatgtcaaatatggatcatagtttacatgatgatgccttaccaattaacagttctctgtccattccta
ccacttcatccatccagtatgtaccttcagactctccccctccccttcaggtatcagaaatcgttcatcagacggctcta
cagaacacacaccaggtaaatccaaacattgaccaggagttgccacagcccagacaagccgctaccagcaatatgtcaaa
catggatcgtagtgtaact

Protein
Protein IDpfu_aug2.0_5598.1_29448.t1
Definition-
>pfu_aug2.0_5598.1_29448.t1
MEIDVRFLISLLLISSAICQKSDPVDGNCGECDTSKCPVKDNTECVAGFTKDKCDCCQLCAKPEGDFCDLPGEVHQYGNC
GAHLNCVKQTTGTGICVCENQDVVCGSNDQEYKTICKLREDKIRTGNEDLIVAYVGPCKAAPVIISGPDSVRNLTGDDVV
LLCEAYGNPVPSLSWKFRRVDGQIVSLPGKYVCVKXGNSDVWTDKSCPYQDASPNGSSQPIPTTSSSQFVLPVSTPPRSG
ILNPIAQENAPQVNPNVDQEMLQARVAATSNMSNMDHSLHDDALPINSSLSIPTTSSIQYVPSDSPPPLQVSEIVHQTAL
QNTHQVNPNIDQELPQPRQAATSNMSNMDRSVT

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495