Gene
| Gene Model ID | pfu_aug2.0_56.1_20123 |
|---|---|
| Locus | scaffold56.1 : 10346 ... 19047 : + |
| To GenomeBrowser | scaffold56.1:10346..19047 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_2007.1_29946 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| embryonic polarity protein dorsal isoform x2 | GO:0003700 GO:0005634 GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20123.t1 | 1 | 1 | RHD | 87 | 253 | 0.0 | 241.4 | 0.0 | 0.0 | 240.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20123.t1 | gi|14906471|gb|AAK72691.1| | 0.0 | |
| pfu_aug2.0_56.1_20123.t1 | gi|14906463|gb|AAK72690.1| | transcription factor Rel 1 [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_56.1_20123.t1 | gi|676485618|ref|XP_009063713.1| | hypothetical protein LOTGIDRAFT_107626 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_56.1_20123.t1 | gi|675886664|ref|XP_009028834.1| | hypothetical protein HELRODRAFT_69490 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_56.1_20123.t1 | gi|524877463|ref|XP_005095433.1| | PREDICTED: uncharacterized protein LOC101860399 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20123.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20123.t1 atggcaaatttaagtagtgcagacttgcagcgtttcatcctaggagatactgatgacactattatccagcaattagattt cactggacccacggataatgagtactcctatgtacagaatttaatagcccactcccagcctgcgcctcagcctgttcaga catacaacaatcctggaccatcccgtcagaatagatcgactacaaagccagggggaggtaaaagtatgcctcagaccact ccagacggaatatggactgagataatggaacagccgaaacagaggggcttacggttccgttatgagtgtgagggacgatc agctggtagcatccccggggagagcagcacaaatgagaagaagaccttcccaacaataaagattcacaactacactggta ctgctgtaatcgttgtgtcatgtgtcaccaaggacacaccatacgacccccacccccataatttggtgggcagggactgt aagaggggagtgtgcacactcaaggtcaaggacactaatactatcacctttccacatttgggcattcaatgtgctaaaaa gaaggatgtgacagataatctaaggcagcgcaaagagattaatgttgatccctatcaaagtggatttaagcatatgaata aagctaacaacatagatctgaacgtagtacgactctgtttccaagtcttcctgccggatgaccagggtaaaatcactcgc atcgtaccacctgtagtctcccatcctatacatgacaaaaaatctctgaatgagttagttatctgtagagtggacaggtc ctctggtaaagctaaaggtggagatgaggtgttcctattgtgtgagaaaataaacagagatgacataggagtgaggtttt accaggagaacagctctggtgatactatctgggaagattacggtgaattcagtgttaatgacatccatcgtcagtacgct atcgtgttcaaaacacccccgtataaagacaccctgataagtcaaccagtagaagtcagaatgcagctgaaacgacaaaa tgacgcagagacaagtgaagcgattcctttcatttatatgccagaagatcctgatccagaccgaatcatggagaagagaa aacgtaaggcagatcaactgaaaagctggggattcaacttggattcttccagcatgtctggagatgacatcaaacagaga ctgaagctcaaagccactaaatcaaggattaaagcagaagcccatacacctgacataccgctatgggacaacatagataa tgtaccaggtcctagccaatcagctgtcattgaatcatcctcatcctctgtgaacgtaaggtccagtgacaacacggcca tgggtaatgttacaatcactgcctcggaaaatgtgcaaaggcaactagctctattaccagaacaaattcaaaatcaaatt cttcaacagttggccatgcagaaactacgtgaccaagcgagactccgtcaaattgaggatagcctctctcagcctcctcc tacctcctctaatttcttaggtgatttcaattcccagaattcccaattcacaatggctcagcagcagactgcatcaggag ggcccctgataggtgatgtgtcaatgcagcaggcagctgctaacaatcaaaatgacatctcgcacgctgttgacttgaat atggtacaaacttacttaggtgaccaaggacaaaatgtgtctttcgatagtttcggttccctgacggggaacattatgaa catagattgtgatagcaatgtggcagctaatgttaacatcagcagtacggacacttcacagtcccaccagtacacgatgc agcagaatgaggtcgatgcagcaatccaatctctacagtctcaatcctga |
|
Protein
| Protein ID | pfu_aug2.0_56.1_20123.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20123.t1 MANLSSADLQRFILGDTDDTIIQQLDFTGPTDNEYSYVQNLIAHSQPAPQPVQTYNNPGPSRQNRSTTKPGGGKSMPQTT PDGIWTEIMEQPKQRGLRFRYECEGRSAGSIPGESSTNEKKTFPTIKIHNYTGTAVIVVSCVTKDTPYDPHPHNLVGRDC KRGVCTLKVKDTNTITFPHLGIQCAKKKDVTDNLRQRKEINVDPYQSGFKHMNKANNIDLNVVRLCFQVFLPDDQGKITR IVPPVVSHPIHDKKSLNELVICRVDRSSGKAKGGDEVFLLCEKINRDDIGVRFYQENSSGDTIWEDYGEFSVNDIHRQYA IVFKTPPYKDTLISQPVEVRMQLKRQNDAETSEAIPFIYMPEDPDPDRIMEKRKRKADQLKSWGFNLDSSSMSGDDIKQR LKLKATKSRIKAEAHTPDIPLWDNIDNVPGPSQSAVIESSSSSVNVRSSDNTAMGNVTITASENVQRQLALLPEQIQNQI LQQLAMQKLRDQARLRQIEDSLSQPPPTSSNFLGDFNSQNSQFTMAQQQTASGGPLIGDVSMQQAAANNQNDISHAVDLN MVQTYLGDQGQNVSFDSFGSLTGNIMNIDCDSNVAANVNISSTDTSQSHQYTMQQNEVDAAIQSLQSQS |
|