Gene
| Gene Model ID | pfu_aug2.0_56.1_20128 |
|---|---|
| Locus | scaffold56.1 : 166276 ... 186917 : - |
| To GenomeBrowser | scaffold56.1:166276..186917 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_4615.1_16447 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| src family kinase 7 | GO:0001702 GO:0004674 GO:0004713 GO:0005524 GO:0005634 GO:0005829 GO:0006955 GO:0007166 GO:0009966 GO:0018108 GO:0042552 GO:0045859 GO:0046777 GO:0051480 GO:0060027 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | zf-RING_2 | 111 | 157 | 1.4e-07 | 31.2 | 2.5e-10 | 2.8e-07 | 30.2 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | zf-C3HC4_3 | 111 | 159 | 9.3e-06 | 25.2 | 1.6e-08 | 1.9e-05 | 24.2 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | zf-C3HC4 | 112 | 156 | 8.7e-09 | 34.9 | 1.6e-11 | 1.9e-08 | 33.8 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | zf-C3HC4_2 | 112 | 156 | 5.3e-07 | 29.5 | 1.0e-09 | 1.2e-06 | 28.4 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | SH2 | 275 | 362 | 2.4e-18 | 65.7 | 4.1e-21 | 4.7e-18 | 64.7 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | Pkinase_Tyr | 404 | 649 | 0.0 | 283.1 | 0.0 | 0.0 | 282.6 |
| pfu_aug2.0_56.1_20128.t1 | 1 | 1 | Pkinase | 404 | 648 | 0.0 | 171.0 | 0.0 | 0.0 | 170.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20128.t1 | gi|676444681|ref|XP_009050507.1| | hypothetical protein LOTGIDRAFT_213681 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_56.1_20128.t1 | gi|215422319|ref|NP_001135851.1| | src family kinase 7 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_56.1_20128.t1 | gi|632954379|ref|XP_007892933.1| | PREDICTED: tyrosine-protein kinase Fgr isoform X4 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_56.1_20128.t1 | gi|632954373|ref|XP_007892930.1| | PREDICTED: tyrosine-protein kinase Fgr isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_56.1_20128.t1 | gi|632954377|ref|XP_007892932.1| | PREDICTED: tyrosine-protein kinase Fgr isoform X3 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20128.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20128.t1 atggaaaataagatcagtaagcctaagtccgccatacggcacgtgcgaagtttccttacgggagcctgtgcaagctccgg ggaaaggaaaagttctggaattcagctagtgtttcccagttattcccaaaacggagaggagtgttcggataactgttggt ttccaggggaaggaactctatcagacacctccgccgtggaagggcttgtcacaatgccgaaaaaacgtgttcgaaagaaa aagagattctttgttccagaatggctaaccatggccaggtctaccagcaatagaaccagtctcaaagaaaaactgcaaga agagtttctatcttgtaagatctgcctggagcctttcatcaaacctaaagctttaccctgtctacacagcttctgtgaac attgcttacgtgattatgtacggcgacaccctggggagaaacctggacattttccttgccctatgtgccgtaaggacaca cccatcccgtgtgggggtatcggtgatttcacggacaatttcttgttgttaagtttatcggatacattagatgaagatga ggatcactggactatccctcagcactcccctgggggtgtacgtagtagtactcatatatccccaccccggacactagccc cacccacaccacaggaacaacatctacgcacttacgatttatcggatacattagatgaagatgaggatcactggactatc cctcagcactcccctgggggtgtacgtagtagtactcatatatccccaccccggacactagccccacccacaccacagga acaacatctacgcacttacgattggtactttggaaaagtttcccgtcatgcatcagaggattggttattaagccccggct atcctaaaggcacgttcctcctgcggcagggagaggcagcccctgatacgtatactttatctgttcgtgactgtgatgaa ttgagaggttatctagtgaaacattataagatttacactggacgcacaaatgactcaattgtagaattctattatattac tccgaaaagaacatttagatctctgttggatttagttacacattacacagtgtctgcagatggattatgctgtaagcttg cacagccctgtataaaacctcgatctttgatatgggcctttgatcggggaaaatctgatgagtttggtactacccgagat actatattactaatcaggaaactcggtagtggccagtttgcagaggtctggcttggcaactggcacagttcaagggaagt ggctatcaaaatgcagaagaaggattcggtaacgactgcagcatttctagatgagagtcagatactgaaacagttacagc atcccaatataatacgcctgttggctgtgtccagcgaagccgagcccatatacctcattatggagtacatgccccagggg cgactgtctatgtacctaagggagggtaatggcaaggacctaggatccacacagctactttggatagctgctcaaattgc tgaagggatggcctatatggagaaagagaaatttgttcatcggaaccttggtgctagaaacattttagttggggatggca atgttgttaaaatagcaggatttggcatgacaaaggttgtagatgatcctgattttaatttccgaagaggcttgaagatg gccattaagtggatggctccagaagtgttactttgtaacaaatacagtacaaaggcagatgtttggtcctttggtatagt acttatagaaatctttacctacggcaaggagccttatgatggaatgggttcaaaagaagcctttcagcatgtgcaacaga actatcgaatacctcgtcctgataactgtccctcggaagtgtacgatgtcattcttacgtgttggaatgccaatcctcca tcacgaccaacgtttgactatctgaacacaaaaaagtccggaaaactgatattcggacagacggacagacagacggacgg acggacggacggacagacggacggacagacagaccgagaggaaactaagagtccccttcggcgttgccggtag |
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Protein
| Protein ID | pfu_aug2.0_56.1_20128.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20128.t1 MENKISKPKSAIRHVRSFLTGACASSGERKSSGIQLVFPSYSQNGEECSDNCWFPGEGTLSDTSAVEGLVTMPKKRVRKK KRFFVPEWLTMARSTSNRTSLKEKLQEEFLSCKICLEPFIKPKALPCLHSFCEHCLRDYVRRHPGEKPGHFPCPMCRKDT PIPCGGIGDFTDNFLLLSLSDTLDEDEDHWTIPQHSPGGVRSSTHISPPRTLAPPTPQEQHLRTYDLSDTLDEDEDHWTI PQHSPGGVRSSTHISPPRTLAPPTPQEQHLRTYDWYFGKVSRHASEDWLLSPGYPKGTFLLRQGEAAPDTYTLSVRDCDE LRGYLVKHYKIYTGRTNDSIVEFYYITPKRTFRSLLDLVTHYTVSADGLCCKLAQPCIKPRSLIWAFDRGKSDEFGTTRD TILLIRKLGSGQFAEVWLGNWHSSREVAIKMQKKDSVTTAAFLDESQILKQLQHPNIIRLLAVSSEAEPIYLIMEYMPQG RLSMYLREGNGKDLGSTQLLWIAAQIAEGMAYMEKEKFVHRNLGARNILVGDGNVVKIAGFGMTKVVDDPDFNFRRGLKM AIKWMAPEVLLCNKYSTKADVWSFGIVLIEIFTYGKEPYDGMGSKEAFQHVQQNYRIPRPDNCPSEVYDVILTCWNANPP SRPTFDYLNTKKSGKLIFGQTDRQTDGRTDGQTDGQTDREETKSPLRRCR |
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