Gene
| Gene Model ID | pfu_aug2.0_56.1_20129 |
|---|---|
| Locus | scaffold56.1 : 215788 ... 230417 : - |
| To GenomeBrowser | scaffold56.1:215788..230417 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_41094.1_63060 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uv radiation resistance-associated gene | GO:0005768 GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20129.t1 | 1 | 1 | Atg14 | 197 | 439 | 4.0e-21 | 75.2 | 1.4e-24 | 6.9e-21 | 74.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20129.t1 | gi|676444673|ref|XP_009050505.1| | hypothetical protein LOTGIDRAFT_158830 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_56.1_20129.t1 | gi|524911015|ref|XP_005110379.1| | PREDICTED: UV radiation resistance-associated gene protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_56.1_20129.t1 | gi|585651104|ref|XP_006814690.1| | PREDICTED: UV radiation resistance-associated gene protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_56.1_20129.t1 | gi|573879774|ref|XP_006628101.1| | PREDICTED: UV radiation resistance-associated gene protein-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_56.1_20129.t1 | gi|589938967|ref|XP_006982231.1| | PREDICTED: UV radiation resistance-associated gene protein [Peromyscus maniculatus bairdii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20129.t1 atggaggctgctgggttgattaaagcagagaatatatttgagctaccaacttttcagagaagacttagacatttaaaaag tgtagctgtaagaaatttgaaatgctgccatattggtggaaaagacatcacaaagcttcagtctttcttcacattgcata gagatggaaaaaggaaagctttctataagagtgagaagattacaggatctttaaatccaacctggcagagttttgacatg agtcaatatgacgctgatatcaacactaaagctcaaaccatgcagttacgagtttgggttgggcaaaatgactcctgtcg actcctcttggattgggatgtagatttaatggcactagtctttcatgcagacaagttacaggatacaggcatgaagtaca ctgctaatactgtgatatttggaatgtttgataagtacttccgtgctccagaatctgaagtgccaacagaaaattctgcc tccaatggaaaccatcatgtgatcaaagtagagtcctcttccaccagaaactcctacaccacaagttccttgtccagaat ttacacagtcttgagagctataaagcaaacacaagcctctgtaaacagggtacatcattcaatagacgatagactactat catcacaagagaaatccaggaagctggccctgcgagaagatcttttactgaagcgaggtcaattgaggaatgaagtagaa tggcagaccactctcattcaacaaacaaaggatgcatacgataagaaaaaatctgccaatgataataaacagtcagaatt tgatgaaaagaatgaaaaattaaacagagaaaaacaagaattgagagaaaaaaggaagttttacaaccaaacaagagaaa atttaatcaaggaaaatgctcagcttgcgatcaggaggaagcaactcttgtcagagttggccacctatatctatcctatt tctgaaagtaaagacaatagtttctatatttgtagagtcaaactcccaaactcagaagatttccaaggtcatgatgagac aacgatagcgatttctcttggctacacgtgtcatatggtgcttatgatgtcacacatattagacattccgctacgatatc ccatggtgcatcgtgtatcacgctcactcatccgtgatcacattcacacaaaacttgctgataaagatagagaatttcct ctctactcaaaaggaaaagaaagatttcagtttaactacggagtttttctgctgaataagaatatcagtcagatgagatt ttacttagggcttgggactacagacttaaggactactctgcagaatatcaaaactatgatggagctgcgattaggaatca aagtagatatgccgtcagcaggaaggttgtatttgtcaggcagtgaggggaaggagaaagtgttcagtgactttgataag acagacacccagagttctattacctccatgggtagagtcagtctgcctgatagttacgacgcacgctatatggacagtac ggatgtaggggtcagaaactctggtaactatagtacaatggaccagacagacagattcctacaagatgtacggagggaat ttgaggaggaggaattgtttaatcccaccgaggataacttcttcaaagtggcaaatccaccgtcagaaaggctggatgtg ttcaataattttgatgatatgtgtgcaatagaggacaagtgtactcacaaggataagactgtagttgtggacggctttac aaactctctacaaaggacttctagttcaaactttcagcatgaacaaaatggatttagcaatctaccagatgttgaatcta aagatttacaattaagtaaaggtagtactaagtctttggaacattctacgatgtcgggtaatagtgcaatatcaaatggt gatatagaaccctacgatttacgtggaccaagtgtagatacagatatgatacaaacttcacagtcccattcctga |
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Protein
| Protein ID | pfu_aug2.0_56.1_20129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20129.t1 MEAAGLIKAENIFELPTFQRRLRHLKSVAVRNLKCCHIGGKDITKLQSFFTLHRDGKRKAFYKSEKITGSLNPTWQSFDM SQYDADINTKAQTMQLRVWVGQNDSCRLLLDWDVDLMALVFHADKLQDTGMKYTANTVIFGMFDKYFRAPESEVPTENSA SNGNHHVIKVESSSTRNSYTTSSLSRIYTVLRAIKQTQASVNRVHHSIDDRLLSSQEKSRKLALREDLLLKRGQLRNEVE WQTTLIQQTKDAYDKKKSANDNKQSEFDEKNEKLNREKQELREKRKFYNQTRENLIKENAQLAIRRKQLLSELATYIYPI SESKDNSFYICRVKLPNSEDFQGHDETTIAISLGYTCHMVLMMSHILDIPLRYPMVHRVSRSLIRDHIHTKLADKDREFP LYSKGKERFQFNYGVFLLNKNISQMRFYLGLGTTDLRTTLQNIKTMMELRLGIKVDMPSAGRLYLSGSEGKEKVFSDFDK TDTQSSITSMGRVSLPDSYDARYMDSTDVGVRNSGNYSTMDQTDRFLQDVRREFEEEELFNPTEDNFFKVANPPSERLDV FNNFDDMCAIEDKCTHKDKTVVVDGFTNSLQRTSSSNFQHEQNGFSNLPDVESKDLQLSKGSTKSLEHSTMSGNSAISNG DIEPYDLRGPSVDTDMIQTSQSHS |
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