Gene
| Gene Model ID | pfu_aug2.0_56.1_20131 |
|---|---|
| Locus | scaffold56.1 : 237581 ... 243087 : - |
| To GenomeBrowser | scaffold56.1:237581..243087 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_14921.1_68799 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cathepsin l | GO:0008233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20131.t1 | 1 | 1 | Peptidase_C1 | 37 | 232 | 0.0 | 234.7 | 0.0 | 0.0 | 234.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20131.t1 | gi|261289789|ref|XP_002611756.1| | hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_56.1_20131.t1 | gi|261289787|ref|XP_002611755.1| | hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_56.1_20131.t1 | gi|158300877|ref|XP_001689282.1| | AGAP011828-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_56.1_20131.t1 | gi|699248925|ref|XP_002130162.2| | PREDICTED: cathepsin L1-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20131.t1 atggatatgtttaacagcatttatcaggacaaaaacaagaaaataaaatttatttcactctggctagcaatgttatgtga ccatcctatgacaggatgtaatttgtttggatgtggagcgtgctgggccttttctgctactggtgctcttgagggacaac acgcgaaaaagacaggaaacttggttcctctgtcagagcagaacctggtcgattgttcttacacacaaggtaacaatggc tgttatggtggattgatgacacgagctttccagtacgtggtaacgaacgatggcattgacaaggagaaggaatataaata tgcagctggcgaccgcttgttttgtcactacaagaagttatttcgcggtgccacggcgtcaaattacacggccctgccta gcggcaatgagacagcccttcagtgggcggtggctggggttgggcctgtgtcagtgggtatagaggcgtgggacagcttc cagctatacgattcgggagtatactacaacaaagaatgtacagggacaggtttgaaccacgcagtattggccgttgggta cgggacgtacctcggagatgactattggctaattaaaaacagctggggcaccgactggggaatggagggatatgcaatga tggcacggaaccgggaaaacaactgtggcatcgcatcacaagcaagcttccctataatgtga |
|
Protein
| Protein ID | pfu_aug2.0_56.1_20131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20131.t1 MDMFNSIYQDKNKKIKFISLWLAMLCDHPMTGCNLFGCGACWAFSATGALEGQHAKKTGNLVPLSEQNLVDCSYTQGNNG CYGGLMTRAFQYVVTNDGIDKEKEYKYAAGDRLFCHYKKLFRGATASNYTALPSGNETALQWAVAGVGPVSVGIEAWDSF QLYDSGVYYNKECTGTGLNHAVLAVGYGTYLGDDYWLIKNSWGTDWGMEGYAMMARNRENNCGIASQASFPIM |
|