Gene
| Gene Model ID | pfu_aug2.0_56.1_20133 |
|---|---|
| Locus | scaffold56.1 : 275358 ... 296308 : + |
| To GenomeBrowser | scaffold56.1:275358..296308 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_16539.1_68981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20133.t1 | 1 | 1 | Pep_M12B_propep | 57 | 171 | 6.1e-14 | 51.9 | 6.8e-17 | 1.1e-13 | 51.0 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 1 | Reprolysin_2 | 227 | 259 | 6.8e-26 | 91.3 | 3.6 | 5900.0 | -2.9 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 1 | Reprolysin_5 | 281 | 431 | 9.5e-22 | 77.8 | 5.8e-25 | 9.5e-22 | 77.8 |
| pfu_aug2.0_56.1_20133.t1 | 1 | 1 | Reprolysin_3 | 284 | 400 | 5.4e-14 | 52.7 | 1.4e-16 | 2.4e-13 | 50.7 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 2 | Reprolysin_2 | 289 | 450 | 6.8e-26 | 91.3 | 4.1e-29 | 6.8e-26 | 91.3 |
| pfu_aug2.0_56.1_20133.t1 | 1 | 1 | Reprolysin_4 | 302 | 445 | 2.7e-18 | 66.2 | 3.4e-21 | 5.5e-18 | 65.2 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 1 | Disintegrin | 477 | 553 | 7.4e-11 | 42.1 | 5.6e-13 | 9.2e-10 | 38.6 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 2 | Reprolysin_5 | 508 | 537 | 9.5e-22 | 77.8 | 2.5 | 4100.0 | -2.6 |
| pfu_aug2.0_56.1_20133.t1 | 2 | 2 | Disintegrin | 583 | 609 | 7.4e-11 | 42.1 | 0.036 | 60.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20133.t1 | gi|657588635|ref|XP_008298667.1| | PREDICTED: disintegrin and metalloproteinase domain-containing protein 10 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_56.1_20133.t1 | gi|704531074|ref|XP_010178497.1| | PREDICTED: disintegrin and metalloproteinase domain-containing protein 10, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_56.1_20133.t1 | gi|694853296|ref|XP_009468059.1| | PREDICTED: disintegrin and metalloproteinase domain-containing protein 10 [Nipponia nippon] | 0.0 |
| pfu_aug2.0_56.1_20133.t1 | gi|723139915|ref|XP_010286827.1| | PREDICTED: disintegrin and metalloproteinase domain-containing protein 10, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_56.1_20133.t1 | gi|690437359|ref|XP_009319880.1| | PREDICTED: disintegrin and metalloproteinase domain-containing protein 10 [Pygoscelis adeliae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20133.t1 atgatgtttcaaaactttgttgaccttttgactttgacctcagagacagagaacagcaaagtatcaaaatattatttatg tgcatattctactgtctttacagagcaaaaagcattagacgactacatccgtcattacgaggagttatcatacgacacat cagatctccatgaacgtcatatacgtgctaaacgatcaactagtgataaaagcctatcattgaaattcaaagctcatgga agagatttccatcttgatctcaagccttgcaaatccatttttactccagaccacaaattgcgtcataataatgggacaga agaaaatatagatacgtcatttatatatgatggtgtcgtagtcggtgcacctgatagttctgtacatggtgcagtaattc aaggaatattccgtggtgttgtgaggattcctggggacaccaactaccatatagagtcagcacataggttctttggtagt cagcagaacaaagatttccattctgtgatatacaaggaggagcacattaacttagatccatacagacacaagaggggccc aagtaattttcctggaacttgtgccaacgatgaacacttacaatggatgcagaaggtgtcggagtctgccatcccccaga acagagccatgcggactgagtatgaagatggttaccataataagtattctgccgaagctaatgagtattctcaccgtcag aaacgatccacggggagctgtaacatcggcacaaagaatacctgctatctctatctcagatctgatccattgcttttcaa caaactgaaagaaggcgtaggagatatcatgacagatgagacagagaattgtaataatcaacttcagaagtcgtcattct gtaatcctaacattgacgtcagtaacttcctgaacctgaactccctgcagaatcacagcgatttctgtctggcttatatc tttacgtacagagacttcacgcagggaactctgggactggcctgggtgggatccccgtccagaaatgctggaggtatatg tgaaaagtggaaacagtatacagagggctctcagcaggtgtataagagtcttaacactggcatagttactatagttaact acggtaaacgtgtggcacccagagtttctcagcttacatttgctcatgaagttggtcataactttggatcaccccatgac agtggtcaacaatgtgcgccctatggtaccagccaacccaatgccaaccagggtaactacattatgtttgccagtgctac acaaggaaacagggaacataatgatgagttctctgtatgcagtaaggataatatgaccagagtcattcaggctgttactg gtcaaagtaatggcaaagtcaattgttttgaggtttctggtcaagcatcgtgtggtaatggtatagtagaagacggggag gagtgcgattgtgggtatgaggaggattgtacagacacatgctgtaatcctaaaataactggtcaagatagatctataga ctgtaaactcaaagctgatgcacaatgcagtcctactgccggaccatgctgcacatcttcctgcaattttgtgacatcaa cagccaataaactatgcagagcatctacagattaaataaaaacaaatggcacctgtattacttcaaagagcaatgattta tctacatatccagaatttaataatgtagtgactgcagcagctgatggtcaggagggagtgaagcttcctgcaggttctcc gtgtaatgattaccaaggatactgtgatgtgttccatcgttgccgtggtgtcgacaatgaagggccactccaacgtctca aaaacctattgtttagtgaagaaacctttacaacaattaaaaactggatcatagaacattggtgggccgttatgttaatg gctataggtcttatattagccatgggattatttatcaaattctgtgctgtacatacacctagctcaaaccccaatgccaa gccggcattacgacttacagatacattacgtcgcaggcgacgacctccaccacagcaaaattatatgccgggtccatcag aacctcctcccccttattcagcaccagggaagggtaaaggtggaccaccccctgggcatcgcaaggatagacaaggcaaa aaccgacagacagattacgagatgaggagaaaatttaaaacatatgagttctgcattctcttgtctgagactaagaacaa taatccgtga |
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Protein
| Protein ID | pfu_aug2.0_56.1_20133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20133.t1 MMFQNFVDLLTLTSETENSKVSKYYLCAYSTVFTEQKALDDYIRHYEELSYDTSDLHERHIRAKRSTSDKSLSLKFKAHG RDFHLDLKPCKSIFTPDHKLRHNNGTEENIDTSFIYDGVVVGAPDSSVHGAVIQGIFRGVVRIPGDTNYHIESAHRFFGS QQNKDFHSVIYKEEHINLDPYRHKRGPSNFPGTCANDEHLQWMQKVSESAIPQNRAMRTEYEDGYHNKYSAEANEYSHRQ KRSTGSCNIGTKNTCYLYLRSDPLLFNKLKEGVGDIMTDETENCNNQLQKSSFCNPNIDVSNFLNLNSLQNHSDFCLAYI FTYRDFTQGTLGLAWVGSPSRNAGGICEKWKQYTEGSQQVYKSLNTGIVTIVNYGKRVAPRVSQLTFAHEVGHNFGSPHD SGQQCAPYGTSQPNANQGNYIMFASATQGNREHNDEFSVCSKDNMTRVIQAVTGQSNGKVNCFEVSGQASCGNGIVEDGE ECDCGYEEDCTDTCCNPKITGQDRSIDCKLKADAQCSPTAGPCCTSSCNFVTSTANKLCRASTDXIKTNGTCITSKSNDL STYPEFNNVVTAAADGQEGVKLPAGSPCNDYQGYCDVFHRCRGVDNEGPLQRLKNLLFSEETFTTIKNWIIEHWWAVMLM AIGLILAMGLFIKFCAVHTPSSNPNAKPALRLTDTLRRRRRPPPQQNYMPGPSEPPPPYSAPGKGKGGPPPGHRKDRQGK NRQTDYEMRRKFKTYEFCILLSETKNNNP |
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