Gene
| Gene Model ID | pfu_aug2.0_56.1_20134 |
|---|---|
| Locus | scaffold56.1 : 297388 ... 306085 : + |
| To GenomeBrowser | scaffold56.1:297388..306085 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_16539.1_68982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20134.t1 | 1 | 1 | PEX11 | 3 | 233 | 1.70006e-41 | 141.9 | 1.4013e-45 | 1.90002e-41 | 141.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20134.t1 | gi|676487276|ref|XP_009064240.1| | hypothetical protein LOTGIDRAFT_235958, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_56.1_20134.t1 | gi|524909262|ref|XP_005109680.1| | PREDICTED: peroxisomal membrane protein 11C-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_56.1_20134.t1 | gi|585692254|ref|XP_006821413.1| | PREDICTED: peroxisomal membrane protein 11C-like [Saccoglossus kowalevskii] | 3.9937e-43 |
| pfu_aug2.0_56.1_20134.t1 | gi|395513489|ref|XP_003760956.1| | 1.99965e-42 | |
| pfu_aug2.0_56.1_20134.t1 | gi|612012780|ref|XP_003340805.2| | PREDICTED: peroxisomal membrane protein 11C isoform X1 [Monodelphis domestica] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20134.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20134.t1 atggacgtagtgcggttactggagtctcacagaggcagggacaagattgttcgtttagctacttatgcttgcatgctgct cagtggcaatggtacaggcaagttccacaaacgtatggagatcctggtgagggagttaggaggatgtaggaccgttctca ggctgtttgacgatatcccaatgctcgcttctaattacatgtatggaactgggtcaaaggagaagaacatccttgtcagg gcatgtagattaatcaccaacttggcgtaccaggttttctttcccgtggaacatgtggcatggttgaatgacaagggcgt catatcaggatttgtatcggccaagtgggtagtgggcagtatagctctgtgggctatagctttaatggcagacattatca gatgtattgcaaggatatcaagcataaaaactgagttgagagaattgaagaaacaacagattctagcttcagaagaaagg aatgaattaagtgaagattcagtcaccattaaagaacagagacggaaactgatagaagaattacaggagacctacctaac tttgatacaagatggaggagacttcatgaacgccataaactggatgccaccaggatttctttgggctggatatttttcac gttccagtagcggcatttttggtttgatttccacaacgatgatgctaataaaagcttggccaaaaaagagtaatcaaaag gcagcctaa |
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Protein
| Protein ID | pfu_aug2.0_56.1_20134.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20134.t1 MDVVRLLESHRGRDKIVRLATYACMLLSGNGTGKFHKRMEILVRELGGCRTVLRLFDDIPMLASNYMYGTGSKEKNILVR ACRLITNLAYQVFFPVEHVAWLNDKGVISGFVSAKWVVGSIALWAIALMADIIRCIARISSIKTELRELKKQQILASEER NELSEDSVTIKEQRRKLIEELQETYLTLIQDGGDFMNAINWMPPGFLWAGYFSRSSSGIFGLISTTMMLIKAWPKKSNQK AA |
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