Gene
| Gene Model ID | pfu_aug2.0_56.1_20135 |
|---|---|
| Locus | scaffold56.1 : 307567 ... 329667 : - |
| To GenomeBrowser | scaffold56.1:307567..329667 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_19291.1_40141 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase arkadia isoform x5 | GO:0044238 GO:0044260 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20135.t1 | gi|632938334|ref|XP_007904587.1| | PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform X2 [Callorhinchus milii] | 1.0e-20 |
| pfu_aug2.0_56.1_20135.t1 | gi|632938332|ref|XP_007904583.1| | PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform X1 [Callorhinchus milii] | 3.0e-18 |
| pfu_aug2.0_56.1_20135.t1 | gi|632938336|ref|XP_007904594.1| | PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform X3 [Callorhinchus milii] | 6.0e-18 |
| pfu_aug2.0_56.1_20135.t1 | gi|558112338|ref|XP_006085959.1| | PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform X5 [Myotis lucifugus] | 6.0e-15 |
| pfu_aug2.0_56.1_20135.t1 | gi|554583768|ref|XP_005883344.1| | PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform X4 [Myotis brandtii] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20135.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20135.t1 atgacacacttagcaacgtcagaagcaacatcaatccaagctaattataagatggaagctgaggttttaagtgcagagtc tagttcctcttcatcagagtggacgactcaggcagactttgatgaattgaaaacaaaggatgaatcagaaatatcaaagg aagtcacagagactttaataccagatataaaaatagaagaagagttacatgctcaggctgaagtaatcgctgaacaggct gtggaattaacagagaaaagcattgatgtaccctgggcaggcacagataatgttgatgttgtatcaatggaaactacatc ttccaattcagctgtaaatggtgtaccagagtcaggggtggagaatttccctgtgataacagtaagcccggactctaaca ctaacatcacagataacttcagaagctacatggatcatctgtcccacctgtctactgatacagactccagctcaacactg tggcctgaaaattccagtgaacagtctgtagtggagatgtgctcctcctcagacgacagtgatgaaatggaggaactgcc tctagctggacagatacagcatgttagcagtacccctcagagacatccccatcacccaccatcagaggcctggagagaag atacacattttgaaatgtttgatgcacagaatccttatgccttgttcaatttgccgcatccaacctactcatctggagca aacagtagattttcccaagcatctttttctccaagacaaacttctaaatcccatcccccatgtccccctgtacctccccc tggggaagagttggcagaggaagccagttgtgtaagacccacagttataggtgctcaccagaatatatcagagggaggtg cttctgacagacatggtgcatcccagccacagaatggtaccgttacaatgggcagtcacaccagtgcttttactcgacct gagacccttccaggggctgacctccctgtgataaggactcccatgggtcagtgtttatcaagacaaagtactgattctgc tccctataacacgcgctctaaaactgcagcagccaatgatctctcagcacatggttcccgtaggaactgtcgtcacggag ccctaggatcaacatgttgtatgcagagatcaaatggtcagagggaatctagactaacggatagaggcagagatcccttt atatctggtcagcctgacatggcctctctaccgtctggtacaggcgtactaaggatggacatggacagtgccgagtatga ccaatcctctcagaatgccagtaaaggtgagagccaatcaggaggtttggctgaccgttcagagttcaggagcttccact ctcctgcctgctcattctccagacctaccccctgtaactacaacatgggtgtaacgcccagtgaggacagtatagacctg acatgttacgatagttcatctagttaccgcgaggaggctgagggaagggagaggtctgaatcccccatcatccccgatgt ccatctgtctgcctcggacagcagtgtcgatagtgatgtagaagttgtaggaatagaaacaaacaggcagagaaggagag ctgataccaatgcctctggtagagccactgtggtagttgatcttacagaatcagatgatgatatagaacagaacaagtta gccaatcgaagaacaaacaatgctgtctctgctccagaggaaccttctactaatacgtctagtcattctgccgcgtcaga tccccatagtaatccctacagacagatgtcttccttaaactttggtcattccctcccccctcaccaggtgtacagacagc ctcctcctgcccatgtacacagctttggacactccctgaggggaacatgtaggggatttgaccatcctggattctgtcat ggacatagctgccaacagttgccacacccacatttttgctctgagaggttccatgatccctgccaggttcaccacatgcc tatgtcagcacctcaccaagggcgaccttcccacagtggccatgtaggtagctcaggacataatcattcctctatggccc actctagcggcccgatacattcacaccaaggtgcccaccacaggtctcatcacccacatgggcatcatcatatgcggcca catgcacagggtgcagcgtgtacaggtaactgttcacatagtggcgtaccccatgtccatcaccctaccccccacccacc tcgagctcacattcaccatcaccattatcacccagctccggtacccattccatctactgctgtggtacctgttctacttc ctcagcctccgtttactgagataacagcaaggaatatcgagggaatgcctttgtttgcacacactacaatgaattcctcc acctgcctacagaacacaggtccacctcccccactgtttagcttccctgcccctcagccgccaagaacacctgttctacc cgggcagcctcagaatccccacccccagggccctatgatgcctgggcagtgtggagctgatatgaaccaagccagaccta gtcacgcctcgcatcagccagatattcagatgccaaactcctgtgcccagaatggtatgtcatcaggaggccaacaccaa catcttcatcaccatctacatcactaccatcatcctcccaggctacatcacttctcttttcctatggctactcacccagc agatttcccaccagtgccccagataccgccaatgcccagttatccggcaggctatcccactctaccagcattcttcaatc ctttagccaatctgccgcgtaatttacagatgagacttggtagaatgatgcttcatcacagaccaacgtatgaggaatta ctgagccttgaggaacgactgggaaatgtgaatcgtggtgctagtcaagacgtcattgagcaaaacaccctaccttacaa gtacagaaaggtcaagcgagcaggtcaggaggatgaccaaacagagaaatgtacaatctgtctcagcgagtttgaggagg aggaggatgaattactgagccttgaggaacgactgggaaatgtgaatcgtggtgctagtcaagacgtcattgagcaaaac accctaccttacaagtacagaaaggtcaagcgagcaggtcaggaggatgaccaaacagagaaatgtacaatctgtctcag cgagtttgaggaggaggaggatgtgagaggtaaatcatggattagctccctggaaagacaaaattga |
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Protein
| Protein ID | pfu_aug2.0_56.1_20135.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20135.t1 MTHLATSEATSIQANYKMEAEVLSAESSSSSSEWTTQADFDELKTKDESEISKEVTETLIPDIKIEEELHAQAEVIAEQA VELTEKSIDVPWAGTDNVDVVSMETTSSNSAVNGVPESGVENFPVITVSPDSNTNITDNFRSYMDHLSHLSTDTDSSSTL WPENSSEQSVVEMCSSSDDSDEMEELPLAGQIQHVSSTPQRHPHHPPSEAWREDTHFEMFDAQNPYALFNLPHPTYSSGA NSRFSQASFSPRQTSKSHPPCPPVPPPGEELAEEASCVRPTVIGAHQNISEGGASDRHGASQPQNGTVTMGSHTSAFTRP ETLPGADLPVIRTPMGQCLSRQSTDSAPYNTRSKTAAANDLSAHGSRRNCRHGALGSTCCMQRSNGQRESRLTDRGRDPF ISGQPDMASLPSGTGVLRMDMDSAEYDQSSQNASKGESQSGGLADRSEFRSFHSPACSFSRPTPCNYNMGVTPSEDSIDL TCYDSSSSYREEAEGRERSESPIIPDVHLSASDSSVDSDVEVVGIETNRQRRRADTNASGRATVVVDLTESDDDIEQNKL ANRRTNNAVSAPEEPSTNTSSHSAASDPHSNPYRQMSSLNFGHSLPPHQVYRQPPPAHVHSFGHSLRGTCRGFDHPGFCH GHSCQQLPHPHFCSERFHDPCQVHHMPMSAPHQGRPSHSGHVGSSGHNHSSMAHSSGPIHSHQGAHHRSHHPHGHHHMRP HAQGAACTGNCSHSGVPHVHHPTPHPPRAHIHHHHYHPAPVPIPSTAVVPVLLPQPPFTEITARNIEGMPLFAHTTMNSS TCLQNTGPPPPLFSFPAPQPPRTPVLPGQPQNPHPQGPMMPGQCGADMNQARPSHASHQPDIQMPNSCAQNGMSSGGQHQ HLHHHLHHYHHPPRLHHFSFPMATHPADFPPVPQIPPMPSYPAGYPTLPAFFNPLANLPRNLQMRLGRMMLHHRPTYEEL LSLEERLGNVNRGASQDVIEQNTLPYKYRKVKRAGQEDDQTEKCTICLSEFEEEEDELLSLEERLGNVNRGASQDVIEQN TLPYKYRKVKRAGQEDDQTEKCTICLSEFEEEEDVRGKSWISSLERQN |
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