Gene
| Gene Model ID | pfu_aug2.0_56.1_20139 |
|---|---|
| Locus | scaffold56.1 : 410387 ... 439761 : + |
| To GenomeBrowser | scaffold56.1:410387..439761 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_5843.1_67340 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20139.t1 | 1 | 1 | Methyltransf_32 | 18 | 154 | 5.1e-10 | 39.1 | 2.2e-13 | 1.1e-09 | 38.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20139.t1 | gi|260820319|ref|XP_002605482.1| | hypothetical protein BRAFLDRAFT_92900 [Branchiostoma floridae] | 1.0e-38 |
| pfu_aug2.0_56.1_20139.t1 | gi|260810540|ref|XP_002600022.1| | hypothetical protein BRAFLDRAFT_74144 [Branchiostoma floridae] | 6.0e-35 |
| pfu_aug2.0_56.1_20139.t1 | gi|675847606|ref|XP_009009363.1| | hypothetical protein HELRODRAFT_159218 [Helobdella robusta] | 6.0e-24 |
| pfu_aug2.0_56.1_20139.t1 | gi|524908823|ref|XP_005109501.1| | PREDICTED: methyltransferase-like protein 25-like isoform X1 [Aplysia californica] | 5.0e-21 |
| pfu_aug2.0_56.1_20139.t1 | gi|755938382|ref|XP_011297416.1| | PREDICTED: protein RRNAD1-like [Fopius arisanus] | 5.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20139.t1 atggggataaagaatgtcacatttgagctgcatgattcccaggagagtatggatcagtttgcaacagtaattcaacagtg ctgtcaggaactgagacaagaatgtgacgaaaaaaagaatcaaaggagcgctgcttctggaatttcaggaaatggtctaa agtcctctgacttcctaatggaaaaacattgttcgaggacaacacaatctgatgttgagccatgtgacattccagatgat tcaagtaatacatcagatactgtgaattcttttaaccagcaatttgattccgtaagtcagtgcactctaacaggggatac agacaatactgaaacagagaaggtattgatggtggggctacactgttgtggggacctgactcctattatgatgaagtact ttaaagctctggactttatgaaaggattgtgttgtgtgagctgctgcttccatagaatgaagtttttagatgaccataat tcaaattgtataaattttcctatgagttgtgtcgtgagaaaattatgccaagagttggagtggcatccgtcactgtatgg tttacggctggcagctcaagagacaagttgtagatggggagtacagagccaggctgatcatgagtatcacatgaagaatg tagcgtacagaggaattctacaactttatcttaataaagaaaatattgcgtacagcaaacaattccgtaagatagccaat aaaaggcacttccagtcatttgaacattacatagaagcagcatgtcagaggatagatattgatgaggatacaaatgaaag ttcaccaccattagacaaaataaaggaaagcttaagggaactttactctgaacaggagcagtatttcaaatatattgaac ctataactattaaattgtgggtagaggtggataagataggattgaatagaggcggttgggataggattggacaggatagg tcagaggtggacatggtaggatag |
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Protein
| Protein ID | pfu_aug2.0_56.1_20139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20139.t1 MGIKNVTFELHDSQESMDQFATVIQQCCQELRQECDEKKNQRSAASGISGNGLKSSDFLMEKHCSRTTQSDVEPCDIPDD SSNTSDTVNSFNQQFDSVSQCTLTGDTDNTETEKVLMVGLHCCGDLTPIMMKYFKALDFMKGLCCVSCCFHRMKFLDDHN SNCINFPMSCVVRKLCQELEWHPSLYGLRLAAQETSCRWGVQSQADHEYHMKNVAYRGILQLYLNKENIAYSKQFRKIAN KRHFQSFEHYIEAACQRIDIDEDTNESSPPLDKIKESLRELYSEQEQYFKYIEPITIKLWVEVDKIGLNRGGWDRIGQDR SEVDMVG |
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