Gene
| Gene Model ID | pfu_aug2.0_56.1_20142 |
|---|---|
| Locus | scaffold56.1 : 554315 ... 587555 : + |
| To GenomeBrowser | scaffold56.1:554315..587555 |
| Genes list of scaffold | scaffold56.1 |
| Synonym | pfu_aug1.0_8797.1_02646 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_56.1_20142.t1 | 2 | 1 | C2 | 169 | 258 | 4.0e-37 | 125.9 | 4.5e-20 | 9.5e-17 | 60.6 |
| pfu_aug2.0_56.1_20142.t1 | 2 | 2 | C2 | 303 | 383 | 4.0e-37 | 125.9 | 8.2e-21 | 1.7e-17 | 62.9 |
| pfu_aug2.0_56.1_20142.t1 | 1 | 1 | C1q | 391 | 516 | 6.0e-25 | 87.6 | 5.4e-28 | 1.2e-24 | 86.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_56.1_20142.t1 | gi|242021084|ref|XP_002430976.1| | synaptotagmin-6, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_56.1_20142.t1 | gi|642919387|ref|XP_008191852.1| | PREDICTED: synaptotagmin-5 isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_56.1_20142.t1 | gi|642919385|ref|XP_008191851.1| | PREDICTED: synaptotagmin-5 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_56.1_20142.t1 | gi|642919383|ref|XP_008191850.1| | PREDICTED: synaptotagmin-5 isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_56.1_20142.t1 | gi|585649416|ref|XP_006814384.1| | PREDICTED: synaptotagmin-6-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_56.1_20142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20142.t1 atggtgtctgtggtcgttttgggtgtggtccttggagttacgggtgttgttgtcagtgttgtcctgttggtaatctgcaa aatgtaccggaaacggaaacaccgccattgcattccttcgtacagcggatatgacgcagttggcgactacaagcctccat ctataatgtctgtttctacaacgtcacaggatgtccagattagtaaggaacaccgaacagtacagccaaggtcatctaga ggaagtacttgtacctcccgcggaagcatttccactgtgtcacgtggtagtgtgaaaagtgaccctttcaatgtggaaga aactagcagtattagtgcgcgtagtgataccagtgtcgacagtcttatctttgatccaaattttggtgctattcgtcccg atctgtatcctagaaaagatgctgttctgcaacagtcttcattggaacagagtcttggaaggcttcatctgaggataaaa tacgacttcagaacttcagacattgtcgttcatttgattgaagctcaggacttgtcgtcagagtcaactcgagacgcaga agggggatttggagacccgtatgtcaggatctgtctaataccggaagttgacgaacgcataagacaatcctctgtaaaac ggaagacttgtaatccgttttataatgaatatttcaaattcccagtgacatttgatgatgtaaaagacagaattctactt ttccaaatctatgattacgacaaattttctcgccataaatcagtcggtgaagtgagcgtcgacttaggaaaagttgatgt cagcaacagtgtagaattatggtcggatatacaaaaagcgacacagtttactggagacatgggggaagtcctgttgtctt taagttacttacccactgccgagaggttaacaatagtggtcctgaaggctaaggaactcgtcatgactggagccggcgga tcttgtgatccctacgttagaatttccttaatcgttgatggaaaaaagatcaaacggaagaaaacatctgtgaagcgaag cacaacaagtccagtctggaacgaggccttatcattcaatattcccgctgaaactttgccaaaggtcaatcttgaggtca cagtactagatcatgatttgattggtcacggtaccaaaagtcatcatgttgcctttgctgcaaagttacgtcatcatatg ttggacaaagatatgaatgtcgttatcaaatttgatgatgtggtaacgaaccaaggtaacgggtacaacaagggcaacgg tacattcacagtgccggtggcagggacttacctgtttgcttggcatattttggttcgagggggaaagaaagctcatgttc atctctatgtcaatggtgcggattcttggagaaccttcgctgacgcaccaggtgcaaaatttgaaccagcgagtgctacc gtagttctgcaattaaaaaagggtgacgctgttcaactaagaactgcgcgctttggtggaaattttataaatggaaacgg atacagtggattcacaggaactctgctttacatgaactga |
|
Protein
| Protein ID | pfu_aug2.0_56.1_20142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_56.1_20142.t1 MVSVVVLGVVLGVTGVVVSVVLLVICKMYRKRKHRHCIPSYSGYDAVGDYKPPSIMSVSTTSQDVQISKEHRTVQPRSSR GSTCTSRGSISTVSRGSVKSDPFNVEETSSISARSDTSVDSLIFDPNFGAIRPDLYPRKDAVLQQSSLEQSLGRLHLRIK YDFRTSDIVVHLIEAQDLSSESTRDAEGGFGDPYVRICLIPEVDERIRQSSVKRKTCNPFYNEYFKFPVTFDDVKDRILL FQIYDYDKFSRHKSVGEVSVDLGKVDVSNSVELWSDIQKATQFTGDMGEVLLSLSYLPTAERLTIVVLKAKELVMTGAGG SCDPYVRISLIVDGKKIKRKKTSVKRSTTSPVWNEALSFNIPAETLPKVNLEVTVLDHDLIGHGTKSHHVAFAAKLRHHM LDKDMNVVIKFDDVVTNQGNGYNKGNGTFTVPVAGTYLFAWHILVRGGKKAHVHLYVNGADSWRTFADAPGAKFEPASAT VVLQLKKGDAVQLRTARFGGNFINGNGYSGFTGTLLYMN |
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