Gene
| Gene Model ID | pfu_aug2.0_560.1_00882 |
|---|---|
| Locus | scaffold560.1 : 15620 ... 18155 : - |
| To GenomeBrowser | scaffold560.1:15620..18155 |
| Genes list of scaffold | scaffold560.1 |
| Synonym | pfu_aug1.0_3070.1_59135 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_560.1_00882.t1 | 2 | 1 | 7TM_GPCR_Srw | 22 | 128 | 4.1e-30 | 105.0 | 3.2e-09 | 1.2e-05 | 24.6 |
| pfu_aug2.0_560.1_00882.t1 | 2 | 1 | 7tm_1 | 37 | 132 | 1.0e-17 | 64.1 | 3.8e-06 | 0.014 | 14.5 |
| pfu_aug2.0_560.1_00882.t1 | 2 | 2 | 7tm_1 | 158 | 376 | 1.0e-17 | 64.1 | 7.1e-18 | 2.6e-14 | 52.9 |
| pfu_aug2.0_560.1_00882.t1 | 2 | 2 | 7TM_GPCR_Srw | 162 | 392 | 4.1e-30 | 105.0 | 4.2e-27 | 1.5e-23 | 83.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_560.1_00882.t1 | gi|676453883|ref|XP_009053499.1| | hypothetical protein LOTGIDRAFT_160192 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_560.1_00882.t1 | gi|524895575|ref|XP_005104270.1| | PREDICTED: probable G-protein coupled receptor 139-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_560.1_00882.t1 | gi|749791424|ref|XP_011148909.1| | PREDICTED: probable G-protein coupled receptor B0563.6 [Harpegnathos saltator] | 4.0e-38 |
| pfu_aug2.0_560.1_00882.t1 | gi|391344611|ref|XP_003746589.1| | PREDICTED: FMRFamide receptor-like [Metaseiulus occidentalis] | 3.0e-37 |
| pfu_aug2.0_560.1_00882.t1 | gi|751792376|ref|XP_011205825.1| | PREDICTED: uncharacterized protein LOC105227954 [Bactrocera dorsalis] | 6.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_560.1_00882.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00882.t1 atgcgccttggggacgaagatgccacaaccggttatcggcgagtgcacggctacataagcggccttgtttgtttgattgg aatgatgggaaatatcatgaatggcatcgtctggtcgcgcaagaatatgctgacatcgacgaactatattctgacagctc tggctattgcagacggtatatcgttgtttatgtactttctttatgcggtgtactttttcattgctacggaaccccgggag ggatattttcattcggaagccgggatgtacttggtcttgatagcgttccatcaatttcttgcatttcatacattggcgaa ttggttgaccatttctctggccattttcagatacatgaaggtttgccgaccaaaaatagcgaagaagtattgtncgttgt ttatgtactttctttatgcggtgtactttttcattgctacggaaccccgggagggatattttcattcggaagccgggatg tacttggtcctgatagcgttccatcaatttcttgcatttcatacattagcaaactggttgaccatttctctggccatttt cagatacatgaaggtttgccgaccaaaaatagcgaagaagtattgcaacatacaacgtgcaaagttaaccatcctgataa cggccatcataactgcgttcgcagcaatcccgttttatttcttttacgaagtatacgaccttagcagtgaaaataaccca atgtacgcaggattttggttaagaaagacgaattttgcagagaatcacaaagactaccagctcacacttctctggctgta cggtgttatattcaaggtccttccttcaatgggaatgatcgttctaagcgttttgatgatcctgaagctccgcgaagcga agcgtcgccatgacgacttgcaatctgggacgtctaaaatgacgtcaggttataccagaactaccgtcatgctcttgatc atagttttgatttacgtcatcacagagctaccaatcggaataacttcgtttttctccgggttggaggcaacggaaagtca ctttttctatttcctgctttactcgtacgtcggagatttgattgaccttttggcatgcgcaaatgggacgataaacttct ttgtgtactacaccatgagtcgacagttccgaacaactttccgaaaggtgtttttctctcgattcttccgaaaatacgca acggctgggcagtcggatattgttcattcggatacaaccgatcataatgaactttcgtccacagttacgcacaaaatttc actcaagagtgtgttacgaaagaaattaagtgcgaaacctacgaggagcaacataagtgacgctagcgcggtatcatag |
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Protein
| Protein ID | pfu_aug2.0_560.1_00882.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00882.t1 MRLGDEDATTGYRRVHGYISGLVCLIGMMGNIMNGIVWSRKNMLTSTNYILTALAIADGISLFMYFLYAVYFFIATEPRE GYFHSEAGMYLVLIAFHQFLAFHTLANWLTISLAIFRYMKVCRPKIAKKYCXLFMYFLYAVYFFIATEPREGYFHSEAGM YLVLIAFHQFLAFHTLANWLTISLAIFRYMKVCRPKIAKKYCNIQRAKLTILITAIITAFAAIPFYFFYEVYDLSSENNP MYAGFWLRKTNFAENHKDYQLTLLWLYGVIFKVLPSMGMIVLSVLMILKLREAKRRHDDLQSGTSKMTSGYTRTTVMLLI IVLIYVITELPIGITSFFSGLEATESHFFYFLLYSYVGDLIDLLACANGTINFFVYYTMSRQFRTTFRKVFFSRFFRKYA TAGQSDIVHSDTTDHNELSSTVTHKISLKSVLRKKLSAKPTRSNISDASAVS |
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