Gene
| Gene Model ID | pfu_aug2.0_560.1_00885 |
|---|---|
| Locus | scaffold560.1 : 73726 ... 78961 : + |
| To GenomeBrowser | scaffold560.1:73726..78961 |
| Genes list of scaffold | scaffold560.1 |
| Synonym | pfu_aug1.0_17159.1_32775 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0005743 GO:0016491 GO:0055114 GO:0070469 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_560.1_00885.t1 | 1 | 1 | L51_S25_CI-B8 | 30 | 81 | 2.5e-15 | 55.9 | 4.4e-19 | 3.3e-15 | 55.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_560.1_00885.t1 | gi|260806853|ref|XP_002598298.1| | hypothetical protein BRAFLDRAFT_69652 [Branchiostoma floridae] | 2.0e-39 |
| pfu_aug2.0_560.1_00885.t1 | gi|241617515|ref|XP_002406931.1| | NADH dehydrogenase, putative [Ixodes scapularis] | 1.0e-37 |
| pfu_aug2.0_560.1_00885.t1 | gi|91083339|ref|XP_974988.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Tribolium castaneum] | 1.0e-37 |
| pfu_aug2.0_560.1_00885.t1 | gi|749749700|ref|XP_011137074.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Harpegnathos saltator] | 4.0e-37 |
| pfu_aug2.0_560.1_00885.t1 | gi|657598728|ref|XP_008304155.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Stegastes partitus] | 8.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_560.1_00885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00885.t1 atggcgtctgcagctgcacttcgatttggcaaacatttaaaagaacttaggatacatctctgtcaaaagtctgcagcaag taaaggagttagagactttatagagaatcactatgttaaagtaaaggagaataaccccagcttccctatactgatcagag agtgcagtggtgtacagccgaaagtttacgctagatatgaatttgggaaggagagcagtgctagtttatctgacatgaat gcagatcaagtgacaaataccatacaacagttagctgccaaagcatcttaa |
|
Protein
| Protein ID | pfu_aug2.0_560.1_00885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00885.t1 MASAAALRFGKHLKELRIHLCQKSAASKGVRDFIENHYVKVKENNPSFPILIRECSGVQPKVYARYEFGKESSASLSDMN ADQVTNTIQQLAAKAS |
|