Gene
| Gene Model ID | pfu_aug2.0_560.1_00886 |
|---|---|
| Locus | scaffold560.1 : 82366 ... 95688 : + |
| To GenomeBrowser | scaffold560.1:82366..95688 |
| Genes list of scaffold | scaffold560.1 |
| Synonym | pfu_aug1.0_3070.1_59131 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_560.1_00886.t1 | 1 | 1 | Beta-lactamase | 52 | 384 | 0.0 | 170.7 | 0.0 | 0.0 | 170.0 |
| pfu_aug2.0_560.1_00886.t1 | 1 | 1 | DUF3471 | 439 | 523 | 8.1e-06 | 25.6 | 2.3e-09 | 1.7e-05 | 24.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_560.1_00886.t1 | gi|676476603|ref|XP_009060846.1| | hypothetical protein LOTGIDRAFT_165563 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_560.1_00886.t1 | gi|291225679|ref|XP_002732828.1| | PREDICTED: uncharacterized protein LOC100372963 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_560.1_00886.t1 | gi|260799523|ref|XP_002594745.1| | hypothetical protein BRAFLDRAFT_81212 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_560.1_00886.t1 | gi|260814932|ref|XP_002602167.1| | hypothetical protein BRAFLDRAFT_97982 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_560.1_00886.t1 | gi|585682515|ref|XP_006812257.1| | PREDICTED: beta-lactamase-like protein 2-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_560.1_00886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00886.t1 atgaatgcaggaaaatatcttggatatattcatatttgcattatatcgttagccgcgattttggtcattgtgtcatgtga tcagaatcagaatagagatgtagactttgacaaaaagctaaaggagtttgaagaatatctagaagaagtggtaagatgta ggaaagtgaccagtggtgctataacgctggtcaaagatgaccgtgtggtgctggctcgaggattcggacacactgaccaa gagaaacggactccggccaccaatgctacacggttttgcatcggatcgctgaccaaggccttcacgagttccattatagc caaagttctaagtgaacaccagagctttacatgggacacccccattacggacatattaaacgattttcagtttgacgatg agctgcgtagtaagtacaccaacttacgtgatttattggcacacaggctcggctatccctccaacttccttgctctatta gtgggctttccagaaaatacgaccagaaaagattttgtaagaatgttacaacaccaagtgcctcaagttggatttcgtac aaatttcctgtatagcaactacatgtacacattagcaggttacttggccgaacatgtcaccggtcagtcttgggaacaga tggtcagcgattacctgttaaggcctctggatatgtccaccagtggtttcgtgaacaccataaagaatttcagcaagttc tctccttcgttctcatttgtggacggaaaagcatttgcaaatgagtttgatcttttatatgcggttgacccatctggtcc ggccggatctatctacacaacagcagacgacatgggtaaatggatgatgttccaccttcacaacgggaacgcatcaggcg acatcctagtacccgagaaattcctaaaggaaacacatgtccgacaaatgatgacacctttcgcagcttcaaacatcttt ttgccggaatttccgatagtggacgcttttgttggctacaacatggggtggatgacgtcagtctacagaggatacaagaa attgtggcattcaggagggatagtcaactactcttcgcttttgtggctgtttcctgataagaatgttggtgtctacgtca cgattacaggagccgagggcaatcggaaaggtccagcaattttccctataacgagtcgagctgctgatatcctactcggc gaagaaccttggctgaacaaaacgacaggatgttcatatccagatccttggagcgaaacgaaagaaattgtaagagcgaa taatacattgcacaaatatgcttggaatattacccgaaatgcatcagattacgcggggatttattcaaacccagcctatg cagacatgactatcaaagtagagacgggtccaaaactaaaactctattttggaagattcggagtattttcactatatccg attacggaagaaaaatttgacgcatatctagagggacctctatcctatgttacgaattcagacgataatacagctccatt ccatttagaatttattgtagattcttctcaggtgacaaagcttaagtttccgtttataccagcagacagcatagtcgaat tagttaagaagaattccaaaaatcaagggagcagtgcaaattctgttccaaatcttcattcaaatcgtttcatgaaatat gtatcaattattgatatgtttttcgtatttctatttcctgtgtttgtttcttttttcagctga |
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Protein
| Protein ID | pfu_aug2.0_560.1_00886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00886.t1 MNAGKYLGYIHICIISLAAILVIVSCDQNQNRDVDFDKKLKEFEEYLEEVVRCRKVTSGAITLVKDDRVVLARGFGHTDQ EKRTPATNATRFCIGSLTKAFTSSIIAKVLSEHQSFTWDTPITDILNDFQFDDELRSKYTNLRDLLAHRLGYPSNFLALL VGFPENTTRKDFVRMLQHQVPQVGFRTNFLYSNYMYTLAGYLAEHVTGQSWEQMVSDYLLRPLDMSTSGFVNTIKNFSKF SPSFSFVDGKAFANEFDLLYAVDPSGPAGSIYTTADDMGKWMMFHLHNGNASGDILVPEKFLKETHVRQMMTPFAASNIF LPEFPIVDAFVGYNMGWMTSVYRGYKKLWHSGGIVNYSSLLWLFPDKNVGVYVTITGAEGNRKGPAIFPITSRAADILLG EEPWLNKTTGCSYPDPWSETKEIVRANNTLHKYAWNITRNASDYAGIYSNPAYADMTIKVETGPKLKLYFGRFGVFSLYP ITEEKFDAYLEGPLSYVTNSDDNTAPFHLEFIVDSSQVTKLKFPFIPADSIVELVKKNSKNQGSSANSVPNLHSNRFMKY VSIIDMFFVFLFPVFVSFFS |
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