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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_560.1_00889
Locus scaffold560.1 : 163967 ... 170495 : -
To GenomeBrowser scaffold560.1:163967..170495
Genes list of scaffold scaffold560.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_560.1_00889.t1 gi|524912245|ref|XP_005110973.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like [Aplysia californica] 6.0e-24
pfu_aug2.0_560.1_00889.t1 gi|524866324|ref|XP_005089984.1| PREDICTED: protocadherin-like wing polarity protein stan-like [Aplysia californica] 1.0e-18

Transcript
Transcript IDpfu_aug2.0_560.1_00889.t1
Definition-
>pfu_aug2.0_560.1_00889.t1
atgcataaatacaattatggactgctatccacttcggcggctactcggatcaactgctgtggagtgatcaaaagatggaa
agccctgggtaaagacgcgggggacgtcttcgtgtcagtttggagacccacgggcaacggacaatcgtacaaactggtgg
ggaaaagcaaactcacaattaggtcgcccggcgacgtggtaaacgtagtccaagcaaagaatgcaagaatctccgtggag
gatggtgattttattggattttatgatcctggacaagccacagtttcgtatggcaccggaagtggcagtaatatacgcat
gcccatggctaatgttgatgtaggtgccacggcggattggagtgctgcatcatcagctagtgggcgtatttatgcattcg
gggccatagggggggacaactccccaccatccttcagtaatctacctaccacggtagacttggacgagcctgagatagga
tctagtgtatttacaatcaaaggggcggatccagacacttatgatataccaaatctgcagtacgttaccgaaaatacgtc
cccatattttactcttaatccaactacaggggaggtaattttgacacaagcgccacctgtcggtgtacatactttgaaaa
tccgggtaactgatcattgtggcgctacgaatgtggggaatctgaagctaaatgtgatatcggctgctgtagagccggag
cctgagagtgaacctagcccagaacatctatgggtagtgggcgttgtgctcggaattttggccctcgccgccattttgat
tgctgcctacttgctaaattattatgggaaaatgcccgggcgaagggcgtccacaagaccatcggatacagaggggcaga
gaaattctaatgaaaaaccggtcgatcaaaagaatgctgatggacagaaaaatgcgaaaggaaagcccgaacaaaacaac
gtaaacaacaaaaaatga

Protein
Protein IDpfu_aug2.0_560.1_00889.t1
Definition-
>pfu_aug2.0_560.1_00889.t1
MHKYNYGLLSTSAATRINCCGVIKRWKALGKDAGDVFVSVWRPTGNGQSYKLVGKSKLTIRSPGDVVNVVQAKNARISVE
DGDFIGFYDPGQATVSYGTGSGSNIRMPMANVDVGATADWSAASSASGRIYAFGAIGGDNSPPSFSNLPTTVDLDEPEIG
SSVFTIKGADPDTYDIPNLQYVTENTSPYFTLNPTTGEVILTQAPPVGVHTLKIRVTDHCGATNVGNLKLNVISAAVEPE
PESEPSPEHLWVVGVVLGILALAAILIAAYLLNYYGKMPGRRASTRPSDTEGQRNSNEKPVDQKNADGQKNAKGKPEQNN
VNNKK

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