Gene
| Gene Model ID | pfu_aug2.0_560.1_00890 |
|---|---|
| Locus | scaffold560.1 : 171076 ... 190219 : + |
| To GenomeBrowser | scaffold560.1:171076..190219 |
| Genes list of scaffold | scaffold560.1 |
| Synonym | pfu_aug1.0_14156.1_54034 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_560.1_00890.t1 | 2 | 1 | Arfaptin | 1100 | 1132 | 3.0e-06 | 26.7 | 0.39 | 5700.0 | -3.6 |
| pfu_aug2.0_560.1_00890.t1 | 2 | 2 | Arfaptin | 1223 | 1427 | 3.0e-06 | 26.7 | 2.0e-10 | 3.0e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_560.1_00890.t1 | gi|676460412|ref|XP_009055614.1| | hypothetical protein LOTGIDRAFT_153481 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_560.1_00890.t1 | gi|260827162|ref|XP_002608534.1| | hypothetical protein BRAFLDRAFT_92367 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_560.1_00890.t1 | gi|675860670|ref|XP_009015895.1| | hypothetical protein HELRODRAFT_188380 [Helobdella robusta] | 4.06377e-44 |
Transcript
| Transcript ID | pfu_aug2.0_560.1_00890.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00890.t1 atgttctgtaaatttctagaatgtccgaaaaatattactggtattatagaaacctaccattccaaagtggataaaagcaa gggccaaacattcatatccagcgaccctgattacgcctttatatgttgtggagtgattcggcaatggaaggcactatttg tggcggagggatacataagatttcaagtatggcgtcggaatatgttattgcgaacaagaacgtatgagctggttggacaa aatttgtatcacgtgaagaaaggtgatgttggtaaagtctcatcctttgatattcatccgcatcgtcgaatctccgtctc tcccgatgacgtcattggatggcaagcagttgggaaagaacttattccgtacaaatatcacgatacattaatcagggggc gtggtttctgggcggagtctgttggcatagtaacaagtggtgacatggtcaaggttggagaaggcaaattcctacaccac aggaaatacattttggcagctcaaacagaaaagaaccaaaagccatactttttaacagacagtggcctagataaagtgca agtttacataaatgacacatatactgctggtgccctcgtttacgaggtcaaggtcagtgataatgacacctatgacgaac atctattggtcattgccatgacaaccaaatccagcgttttcatgtttcaagatcacacaagatcagtgagactaagaaga cctccaaagaaaggagagtacaagttaaaccttgctgttaaggaccagtgtcatgacatgacgacacttacccttcatat aaccgtgattgaaagtcatccagtctcgccggaaagacaagggaaaccggcaatcgtttacatagttggggtaacaatct ccatggtgatagtcatagcgacatttttagtggtgttcgttacaagggatatacacctatggtctgaagattccacaaac atggccaatgaacagatatttttgctggagcgagaacttcgggaacactttcggaagctaggcttctacagggagtttcc aaccaatgaactactccgagaagcccagagtgtttaccactcccttgagtggcctcctcaacttgatgacgatggagacc cctcaccagggcccccaagaaactccaaggatgacgtcatcgaccatgacgaaatacaggaaattgatgctcatgctttg gagacaccctatacttacctcggtcagcatgtccgctatctggtggaatatttaatacgaccagcagtatgtgatctgca caaggcgagagtaatcacaaggtggttgggcagatgtcaggatgatgactacatgaagcacctacctagaacagaatgga gtcaccaagagtcagtggcgggctatctgtggaaactgaggaaaagagacatggactacgacgagctgttccagctaatg gcgagctatgctggattgaaatgcagcaacgtagatggatgtgttaggaataccatcaagtacgaggtgggcgaggattt tgatcggcagagaaagtcatggacagctgtcttgcttgatggagactggcgcttgttggatgttcgttggatctgcgaag cagcttatggaatcctcaaatcaagctgagctattcaggagaatcgaggttcatacaaaacacagtgtcgatttcgggag ttttacttcctcactgatcctgaaatatttatctacgatcatttccctgatgatgaaaaatggcagcttctagctaggaa agtatcttatgcagaagcaaggaaaatggcagcattaagagcggactttttcagacacgatctgactcttagatctcatc cggaagcaaatgtgacctctgaagacggaaacattacgttcaccataggcctcccaaaggatatcagaatgtcctttgtg tacaaattgtatcgttcaaaacaaagcagagagtctatagacccacttcggagtgagctagagagatatgttttcctgga aagagattccgatgagcacgtcatcagagcaggtataagacttccttctgaaggaaggtacttgttcgaaatacacggaa gtgagaatgttgagagtcatcacgcccttcttgttacatacgtcatagtttgtacgggtatcaaggacattgtaaagcct ctgccgccgaatattcgacaggagtggggcccaggggaggatacactcgacatgggaatggttcctgtcactcataagaa gggggacaaagacatccccatccccgagggccatgtcgtacacactattgagggtagcaaaatgaacatcaatgtacgac tgcctgaacctggcgagtacgccctgaatgtgctagccaaagacagaatgaagaaaactaggttttctccagcttgtacc tacctcgttagttgtgatgaggagcctttgcagtctaaaccttttccaaagatcgatggacgacatattggaccgaacga atttttcagtgagctgggattgaaagaggaagatccatggggctcctacatcaacaacctcgtcactggtgaattcacta tgcagataattaagcccttggatattcttgtcttcgcgaatctagcactagaggaaggggagaagtctgaaacatttgat aattacgttgtctgtgatacaataggcaaaaaggtgaaaatcactgcagtgttccctaaaagtggaacatacaaattgac attgtttgcaaggaagaaactactggatgaagacaaagaagatgttccggtttataccaagatcattgaggtggctttgc caactctcactggaatgccaagtcctcttaacccagacattccaatatggtgccatggatatcatcttagggaacccaga aatctttttctaccatcaggtgaaatgcaaaagttatcaattgctgttcctgaggcagaacaagtaagggtcaaaggtca cccggagtgtaaactaaagaaaactgcagaaggatattgggaaggttatcttaagacgggtccacctaggagcacagtgg acataatggtggtctcaaaagaggaacttttgcaaatcgaagttgaacaagagcagctattcaaaacagctttagatgaa cttcaaaccagagaagaagaaaagcttgccaggttgcattcacgtttgaaacaagctgttaaagacagaaatagggctaa gatcgaaaagtacctgttccgtttgaaagaactgagacctgattctcctgatgttgaattagtgcgagcagaaaggcttt tgagagaattgaaagctgacgaagaaagggatattgctaggaaagagctgaggaaggcaacacgtctctgtgacattgtc actttgcagaacgctcttgagaaatttaaacgtctcaatgtgagagaagaagatggtgacttaacttcagcagaggaagt tttccaatctttattggatttagtttcaactcctcggaaacccaaggtaacagacacctctagagtacctcaactcctcc aagaccatcttaggaggaagaaactagatgactctgatgatgaaatagaaccagcggaggcggctttgtccatgatagaa aatgatgaacatatagataaatcatggtcaggcagacggaattggaaatctaggacaatggaggttttcaaaaagtattg gcacgtgatgaaggaacgttccgaacagtcgaagcagacgatcaacgatgatatcgaaaacgagattcaaagattgcgtc atatcaatcagatgtgccgcaaaatgtcacgtgcagcacgacgaattggaagtaactatgacaacctgatcgatagtgaa caagtattccatgaaatactgaatgagacaggtgatggaaatgatagtctaaatgaagatctgacgaacgtatcggcgct tcagcaggaggtgattcatgtagaggaaggcatgaagtctgctttcgatgggtttgcaaaacgaatggatgagctaacta cagaaatggtatcaaaagccgaatcaacggcacgggagcttgaggttactagacttgaaatggcaacagaggaaatgcgg agtaatggatctagcagttctacacggagtgactcgggagtaggttctaaggattacaatccaaacgatgccgtgaaagc ctcgttttatgcagtcaggaatacaatactcgaggaaatcaggactgcaaatgcagctacggaggaggagattcgtcgac agttatcttcccttcaaaagacgatggccgactaccaggggtcacgaagtggaaacaactcgcttcacgaagctcttgct tcctggaaaatctga |
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Protein
| Protein ID | pfu_aug2.0_560.1_00890.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00890.t1 MFCKFLECPKNITGIIETYHSKVDKSKGQTFISSDPDYAFICCGVIRQWKALFVAEGYIRFQVWRRNMLLRTRTYELVGQ NLYHVKKGDVGKVSSFDIHPHRRISVSPDDVIGWQAVGKELIPYKYHDTLIRGRGFWAESVGIVTSGDMVKVGEGKFLHH RKYILAAQTEKNQKPYFLTDSGLDKVQVYINDTYTAGALVYEVKVSDNDTYDEHLLVIAMTTKSSVFMFQDHTRSVRLRR PPKKGEYKLNLAVKDQCHDMTTLTLHITVIESHPVSPERQGKPAIVYIVGVTISMVIVIATFLVVFVTRDIHLWSEDSTN MANEQIFLLERELREHFRKLGFYREFPTNELLREAQSVYHSLEWPPQLDDDGDPSPGPPRNSKDDVIDHDEIQEIDAHAL ETPYTYLGQHVRYLVEYLIRPAVCDLHKARVITRWLGRCQDDDYMKHLPRTEWSHQESVAGYLWKLRKRDMDYDELFQLM ASYAGLKCSNVDGCVRNTIKYEVGEDFDRQRKSWTAVLLDGDWRLLDVRWICEAAYGILKSSXAIQENRGSYKTQCRFRE FYFLTDPEIFIYDHFPDDEKWQLLARKVSYAEARKMAALRADFFRHDLTLRSHPEANVTSEDGNITFTIGLPKDIRMSFV YKLYRSKQSRESIDPLRSELERYVFLERDSDEHVIRAGIRLPSEGRYLFEIHGSENVESHHALLVTYVIVCTGIKDIVKP LPPNIRQEWGPGEDTLDMGMVPVTHKKGDKDIPIPEGHVVHTIEGSKMNINVRLPEPGEYALNVLAKDRMKKTRFSPACT YLVSCDEEPLQSKPFPKIDGRHIGPNEFFSELGLKEEDPWGSYINNLVTGEFTMQIIKPLDILVFANLALEEGEKSETFD NYVVCDTIGKKVKITAVFPKSGTYKLTLFARKKLLDEDKEDVPVYTKIIEVALPTLTGMPSPLNPDIPIWCHGYHLREPR NLFLPSGEMQKLSIAVPEAEQVRVKGHPECKLKKTAEGYWEGYLKTGPPRSTVDIMVVSKEELLQIEVEQEQLFKTALDE LQTREEEKLARLHSRLKQAVKDRNRAKIEKYLFRLKELRPDSPDVELVRAERLLRELKADEERDIARKELRKATRLCDIV TLQNALEKFKRLNVREEDGDLTSAEEVFQSLLDLVSTPRKPKVTDTSRVPQLLQDHLRRKKLDDSDDEIEPAEAALSMIE NDEHIDKSWSGRRNWKSRTMEVFKKYWHVMKERSEQSKQTINDDIENEIQRLRHINQMCRKMSRAARRIGSNYDNLIDSE QVFHEILNETGDGNDSLNEDLTNVSALQQEVIHVEEGMKSAFDGFAKRMDELTTEMVSKAESTARELEVTRLEMATEEMR SNGSSSSTRSDSGVGSKDYNPNDAVKASFYAVRNTILEEIRTANAATEEEIRRQLSSLQKTMADYQGSRSGNNSLHEALA SWKI |
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