Gene
| Gene Model ID | pfu_aug2.0_560.1_00892 |
|---|---|
| Locus | scaffold560.1 : 219076 ... 221109 : + |
| To GenomeBrowser | scaffold560.1:219076..221109 |
| Genes list of scaffold | scaffold560.1 |
| Synonym | pfu_aug1.0_1432.1_58498 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_560.1_00892.t1 | 1 | 1 | F5_F8_type_C | 51 | 168 | 3.3e-08 | 33.4 | 3.1e-12 | 4.6e-08 | 32.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_560.1_00892.t1 | gi|146285275|gb|ABQ18230.1| | 8.0e-17 | |
| pfu_aug2.0_560.1_00892.t1 | gi|585711332|ref|XP_006824724.1| | PREDICTED: uncharacterized protein LOC102801273, partial [Saccoglossus kowalevskii] | 8.0e-16 |
| pfu_aug2.0_560.1_00892.t1 | gi|585674317|ref|XP_006818584.1| | PREDICTED: pentraxin fusion protein-like [Saccoglossus kowalevskii] | 2.0e-15 |
| pfu_aug2.0_560.1_00892.t1 | gi|291223166|ref|XP_002731582.1| | PREDICTED: uncharacterized protein LOC100377761 [Saccoglossus kowalevskii] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_560.1_00892.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00892.t1 atgtgcacagctttaagttgttctctctggcagtctgacgtaatggcgtgttctgttttgatcttcgggctactgatatc cgtaggtgggattcacctcgttcaaagtaacacaggattggtcaacttagcatatggaaagcgcgtaactttaagctcaa actacaatcccccgtatcctggcgcaaacgcagtgaatggtgttctctcagatcttgcacacactggtgctgaagataat ccgtggctacggatcgatttaggagcagagtgttcgattcacgaaatcgaaatttttgcgagatcagactgttgtggttc tcaactacacgacctagaagtatcagtcggcagatctcggagtcagatgtccgtatgtggtcatttcacgggacctgcgc cttcaaacggtgcacgggttgcaatatggtgtccctactccacggttggtcgctatgttgaagtgaaaattgtcaaggat agaaacaacgtactaacacccgctgaggtccttgtgtggggaaacccaaactgcatttaa |
|
Protein
| Protein ID | pfu_aug2.0_560.1_00892.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_560.1_00892.t1 MCTALSCSLWQSDVMACSVLIFGLLISVGGIHLVQSNTGLVNLAYGKRVTLSSNYNPPYPGANAVNGVLSDLAHTGAEDN PWLRIDLGAECSIHEIEIFARSDCCGSQLHDLEVSVGRSRSQMSVCGHFTGPAPSNGARVAIWCPYSTVGRYVEVKIVKD RNNVLTPAEVLVWGNPNCI |
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