Gene
| Gene Model ID | pfu_aug2.0_561.1_04335 |
|---|---|
| Locus | scaffold561.1 : 51736 ... 68445 : - |
| To GenomeBrowser | scaffold561.1:51736..68445 |
| Genes list of scaffold | scaffold561.1 |
| Synonym | pfu_aug1.0_2.1_14611 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_561.1_04335.t1 | 2 | 1 | Band_7 | 39 | 165 | 7.7e-07 | 29.1 | 2.9e-10 | 2.2e-06 | 27.7 |
| pfu_aug2.0_561.1_04335.t1 | 2 | 2 | Band_7 | 249 | 262 | 7.7e-07 | 29.1 | 0.32 | 2300.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_561.1_04335.t1 | gi|524867523|ref|XP_005090572.1| | PREDICTED: uncharacterized protein LOC101853991 [Aplysia californica] | 0.0 |
| pfu_aug2.0_561.1_04335.t1 | gi|260786369|ref|XP_002588230.1| | hypothetical protein BRAFLDRAFT_124696 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_561.1_04335.t1 | gi|291232000|ref|XP_002735949.1| | PREDICTED: uncharacterized protein LOC100378672 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_561.1_04335.t1 | gi|156402239|ref|XP_001639498.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_561.1_04335.t1 | gi|260823218|ref|XP_002604080.1| | hypothetical protein BRAFLDRAFT_71630 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_561.1_04335.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04335.t1 atgagcaagtcagcctgtgcagactgtgatggatgttgcgtctgttggattggtgtcttggctctgtttgggtgtggttt ggtttggatgtcattctcttatgtagagtattacgagttcggattcaaacgtcagaggtctaccggtagtgttgatgtcc atacagttgtcacttccggaaggtacttcatgggaccggattttacatttgacaagtttccttcagatgcccatttcgtg agattgaaagaggcgaaaatattttcatcggacaatcttgaggttaaaatgaacttaaattaccaatactttctacggaa ggacgagctgaagttattacataagtcatacggtgtggattacaaagatgttgtagagtccaaagctttggatgctatta agggagcaacccctaatttttcaatgcgtcagatgataaataacagacgagagttggaggaagcattattcaaagctgtg catgaaagactcggtggaagatgctgtagatcgaattgttctatacacgatttcgcctgtccatctggatgcataccagt ggagaattgcaaggatgaagacaagggaatgttcctagatgtcaagcactttcagattgaatacatcgatattcccttta ctatagagaacaagtatctaactgctttgaccttgttagactacacagcacgagagaagttcatccaaaaggccaaggtc gtcaggaaaaatacatctggaatggttgaagacatcaagaaccaagcaagagagacaatcgagagcgctgaagcaaccgc ttatttgataaactccattgcacttgcgaattactccgccattatagagggggcgaggacggatggactcaagattgctt ttggaatccttggagtggctagccaagagtacaagaatatcatagactatatcagagaactgaaaggaaataaaaacatt aacatgacagtaaacttccagcagagaattgcgggaacattgtaa |
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Protein
| Protein ID | pfu_aug2.0_561.1_04335.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04335.t1 MSKSACADCDGCCVCWIGVLALFGCGLVWMSFSYVEYYEFGFKRQRSTGSVDVHTVVTSGRYFMGPDFTFDKFPSDAHFV RLKEAKIFSSDNLEVKMNLNYQYFLRKDELKLLHKSYGVDYKDVVESKALDAIKGATPNFSMRQMINNRRELEEALFKAV HERLGGRCCRSNCSIHDFACPSGCIPVENCKDEDKGMFLDVKHFQIEYIDIPFTIENKYLTALTLLDYTAREKFIQKAKV VRKNTSGMVEDIKNQARETIESAEATAYLINSIALANYSAIIEGARTDGLKIAFGILGVASQEYKNIIDYIRELKGNKNI NMTVNFQQRIAGTL |
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