Gene
| Gene Model ID | pfu_aug2.0_561.1_04337 |
|---|---|
| Locus | scaffold561.1 : 85857 ... 88245 : - |
| To GenomeBrowser | scaffold561.1:85857..88245 |
| Genes list of scaffold | scaffold561.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycoprotein-n-acetylgalactosamine 3-beta-galactosyltransferase 1-like | GO:0016757 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_561.1_04337.t1 | 1 | 1 | Fringe | 5 | 163 | 4.0e-13 | 49.1 | 5.4e-16 | 4.0e-12 | 45.9 |
| pfu_aug2.0_561.1_04337.t1 | 2 | 1 | Galactosyl_T | 43 | 105 | 3.3e-08 | 33.3 | 4.3e-10 | 3.2e-06 | 26.8 |
| pfu_aug2.0_561.1_04337.t1 | 2 | 2 | Galactosyl_T | 116 | 164 | 3.3e-08 | 33.3 | 0.0037 | 28.0 | 4.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_561.1_04337.t1 | gi|345483017|ref|XP_001604223.2| | PREDICTED: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_561.1_04337.t1 | gi|328790300|ref|XP_623076.2| | PREDICTED: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [Apis mellifera] | 0.0 |
| pfu_aug2.0_561.1_04337.t1 | gi|383854178|ref|XP_003702599.1| | PREDICTED: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Megachile rotundata] | 0.0 |
| pfu_aug2.0_561.1_04337.t1 | gi|241156894|ref|XP_002407886.1| | core 1 UDP-galactose:N-acetylgalactosamine-alpha-r beta 1,3- galactosyltransferase, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_561.1_04337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04337.t1 atgaccagaccaaaggaccacaaaacaaaagcacagagcgtgaaagaaacatggggtaaaaggtgtgacgtcctcctttt tatgagctctgtggaggacactagcttaccaacagtggctttgaaagtcagagaaggcagggacaatctatgggcaaaaa caaaggcagccttcaaatatgtgtatcagaattatagagacagtgctgagtggtttttaaaaactgacgacgatacatat gtgatagtggaaaatcttaagtattttctacaagataaaaatgccagcgagtcattatattatgggaaaagattaaagcc ctttattccccaggggtacatgtccgggggagccgggtacgtcataagtcagagggcattagagcggcttatactggagg gtctcgacaatccgaggatatgcgagagtaagaaaaaggaggatgaggatttagaaatcgggaaatgttttgaacatctc aggataactcccggtgacaccagggatgagcagaagagggaaagatttatgtcgtatgaaatagagaaacatctttaccc cagctcaatgaaacctctgactcgaaactactcgttttacccacagaagaagggattggaatgctgcagtgacttaccaa tctcctttcattacattcatgccgacatgatgctgttctttgaatacattttgtatggagtacatgtagtttcaaatata gacaattcataa |
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Protein
| Protein ID | pfu_aug2.0_561.1_04337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04337.t1 MTRPKDHKTKAQSVKETWGKRCDVLLFMSSVEDTSLPTVALKVREGRDNLWAKTKAAFKYVYQNYRDSAEWFLKTDDDTY VIVENLKYFLQDKNASESLYYGKRLKPFIPQGYMSGGAGYVISQRALERLILEGLDNPRICESKKKEDEDLEIGKCFEHL RITPGDTRDEQKRERFMSYEIEKHLYPSSMKPLTRNYSFYPQKKGLECCSDLPISFHYIHADMMLFFEYILYGVHVVSNI DNS |
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