Gene
| Gene Model ID | pfu_aug2.0_561.1_04340 |
|---|---|
| Locus | scaffold561.1 : 114518 ... 128645 : - |
| To GenomeBrowser | scaffold561.1:114518..128645 |
| Genes list of scaffold | scaffold561.1 |
| Synonym | pfu_aug1.0_2.1_14605 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_561.1_04340.t1 | 2 | 1 | MULE | 88 | 168 | 1.1e-06 | 28.7 | 1.9e-10 | 2.8e-06 | 27.3 |
| pfu_aug2.0_561.1_04340.t1 | 2 | 2 | MULE | 209 | 230 | 1.1e-06 | 28.7 | 0.26 | 3800.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_561.1_04340.t1 | gi|391336217|ref|XP_003742478.1| | PREDICTED: uncharacterized protein LOC100904995 [Metaseiulus occidentalis] | 1.0e-29 |
| pfu_aug2.0_561.1_04340.t1 | gi|391329736|ref|XP_003739324.1| | PREDICTED: uncharacterized protein LOC100899062 [Metaseiulus occidentalis] | 4.0e-27 |
| pfu_aug2.0_561.1_04340.t1 | gi|391332386|ref|XP_003740616.1| | PREDICTED: uncharacterized protein LOC100902345 [Metaseiulus occidentalis] | 5.0e-27 |
| pfu_aug2.0_561.1_04340.t1 | gi|391336247|ref|XP_003742493.1| | PREDICTED: uncharacterized protein LOC100908453 [Metaseiulus occidentalis] | 7.0e-27 |
| pfu_aug2.0_561.1_04340.t1 | gi|391332396|ref|XP_003740621.1| | PREDICTED: uncharacterized protein LOC100903212 [Metaseiulus occidentalis] | 5.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_561.1_04340.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04340.t1 atgatcaacgagggggcaaatttacagtttctaatcaacgagaggccatgtttacagtttcggatcaacaggaagcaaaa tttgcagtctagtatcaacaagaggcaaggaacgaacgcaaacggagcgacacctggtacaaacatcggacgacacttac caaacccacagaatcctggccttcgctatagccacttagctactgcagacgtgttctactgcgacgggaccttctactca tgtcccactctcctccaccagatctattccatccatgtccagattgacaacgtgatgacaccagtagtatacgcactcat accaggaaaaagccagctcatctatcgacgacttttccaaaaacttgacgacaagatgcactcccatggactcagcttca ctccagccactgccatgctggactttgaaacagccgcacacaatgccatcacggagaccatcctaaggaccactaccaaa ggatgctttttccacttaacgcagtgtatatggagggaagcacaagccactagtctgcatatcccctacgacgccgtcaa gacactcgttcgcagagcagccattctctcactcattcccttggacgccatagacgacgtttggttcgaggccctagagg acagagatgatgctgacatcaccgacctaatgcagcaattcaccgactacgtgaccgactag |
|
Protein
| Protein ID | pfu_aug2.0_561.1_04340.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_561.1_04340.t1 MINEGANLQFLINERPCLQFRINRKQNLQSSINKRQGTNANGATPGTNIGRHLPNPQNPGLRYSHLATADVFYCDGTFYS CPTLLHQIYSIHVQIDNVMTPVVYALIPGKSQLIYRRLFQKLDDKMHSHGLSFTPATAMLDFETAAHNAITETILRTTTK GCFFHLTQCIWREAQATSLHIPYDAVKTLVRRAAILSLIPLDAIDDVWFEALEDRDDADITDLMQQFTDYVTD |
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