Gene
| Gene Model ID | pfu_aug2.0_563.1_10930 |
|---|---|
| Locus | scaffold563.1 : 77806 ... 103480 : + |
| To GenomeBrowser | scaffold563.1:77806..103480 |
| Genes list of scaffold | scaffold563.1 |
| Synonym | pfu_aug1.0_4674.1_67037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_563.1_10930.t1 | 1 | 1 | SPRY | 109 | 240 | 9.7e-17 | 61.2 | 1.0e-19 | 1.9e-16 | 60.2 |
| pfu_aug2.0_563.1_10930.t1 | 1 | 1 | AAA_33 | 274 | 419 | 2.9e-21 | 75.8 | 3.6e-24 | 6.6e-21 | 74.6 |
| pfu_aug2.0_563.1_10930.t1 | 1 | 1 | AAA_18 | 275 | 401 | 1.2e-06 | 28.8 | 1.5e-09 | 2.8e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_563.1_10930.t1 | gi|676484805|ref|XP_009063459.1| | hypothetical protein LOTGIDRAFT_52845, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_563.1_10930.t1 | gi|524871479|ref|XP_005092512.1| | PREDICTED: uncharacterized protein LOC101851628 [Aplysia californica] | 0.0 |
| pfu_aug2.0_563.1_10930.t1 | gi|675860268|ref|XP_009015694.1| | hypothetical protein HELRODRAFT_64249 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_563.1_10930.t1 | gi|676433784|ref|XP_009047013.1| | hypothetical protein LOTGIDRAFT_138642, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_563.1_10930.t1 | gi|657743759|ref|XP_008307043.1| | PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like protein 1 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_563.1_10930.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10930.t1 atgaatccataccaagcgggccttgtgcccatgatgatgccccaaccatacatggtggcagtcagattaccaccaggaat ggctgcaccccagagggcaggacaatcagcagctctgttgccaggaatgccactcactgcagctgctgctgcaggagcat caagatttcctactcctcctccaggagcagtacaagcaagcgccctacaagctgcagctcttacgggaatacccacaact ctgagtacagcagcgcctttgacacaaccccctggattttgctttgtatgggcaggtgcacgggctacacatggtgtgaa ggcaggaaaggtttattatgaagtacaaatagtggaacatttacctacagactttggagatgatcatcaggagaaagatc ctcacattctacgtgtgggctggtccattgatgactcttcattccagctaggagaggaacccttttcttatggatatgga ggtactgccagattttctcagaataacagatttacacagtatggtgagaagtttggccatggtgacattataggggccct tctggacttagatagtaaaccaccaaccatctcttacaccaaaaatggaacatggctagggatagcacattctttacatg gttttcctgtcggcgaaaaagctctttttcctcacatactgacaaaaaacattcggttcaaagcgaattttggacaggag ggtcagtggtatccccctcccccaggatataattacttagcacattccccagagaagatccctggaagacaacctcctgc caaaaaaagtgattgtgagatgatcatgataattggactcccaggtgcaggtaaaacaacatttggaatgaagatgcaga aagattatcctgaaaagcgctataacatcataggaacagatactcttattgataaaatgaaagtcatgggtttaccaagg aaaaataactaccatggaagatgggatgtcctcatagataaggcaacaaaatgcctcaataaattatttgaaatagctaa atcaaaacacagaaattacattttggatcaaacaaatgtatatccatcagcaagacgaagaaagatgaaaaatttccaag gattttatagacgagcctgtattctacaacctgatgattctgaactacagagaaggtctgaaaaaagaactgttgaagat ggaaaatatgtaccagaatcagcagttatagaaatgaaggctaactttaaactacctgaggacaatgatcccttgtttga tagtatagaatacgtggaactaggcaaaagagacgtacaggtgttattagacaggtataatgtagaaggtcggcagaatc aggcccctggtcagggaaggtttggtcagcatggcaagtccggaggtccattccagccgcctgctgaccttagacagggg gcttattcaaaccagtcaagtaatgctttgtcccaatacgggtacggcggtcaacctcaaagttatggtcaacaacaggg atatggtggacagagagatgaccagaggtatgactcaggtaggcaccctgcacctgcaggtcaacatgattcagagcctt tagagaagcgtgccagactagatctcagtggcaattcaagtgctttggacctactgaaacaagaatatgctgaagaagag caaccccaggcagcacttgcctcactagttcagccacagttacaacaacaagctgttaaagtagaacctggttttgctgg tatgcagcattttggtcagcagataattctggatcctcagcgagctctagttggacattcactatatggtcaagcaattc aagctcagatgacagcatatggtaatgccacacaagcaggactaagtgctgcagcatttggacagggtgttttagcgcaa agtgcacaaggtttgagtgcacagagtttggcagctcaaggtttgacagctcaaggtttgactgcacaaggtttaggtgc ttctgctctaataggacagccaccacctcctccagcagatctgtatggtgatgtgaaggctttaagaggtcatgcattgg gtacaacactggttaaacaggaaattggtaacttacaatatgctttccaaggcagcactgtggaagataaaaaatggcag gagcaacagccacaaccaactgaacagtatggtgggcagcggaggagtggagaaagcgacagaggtaactctaaggagtc atcatttcaagacaatcagaacaggaatagatcccatggttatgattcttataacgagagatcagaaagacaaaactcat atggtcaaagtagagacagtaattatggtagaagacaagatcaatcaagaggctacagagaccagggaaatgaccgaaga ggtcaggattatgataaaagagaacaaggtcgagatggaagaggtcatagtagaggggatagtagaggagatagcagagg taatgataggggatatcaagataggagagatcaaggaagggataggtctcataatgacagtagatcaagcagccagtcct atcgaggtggcaggtttgatggtggtggtggaagtcagtctcagtcagctcaagactttgaaggacctcccagcagggga tctcaaggctctgactctggagacaagccaaaaagagagaggaggagaccaagcaagtgggacactccagatgaatctaa ctctccaacacaagctgcagcagaaagtggcgtaagtcaagaagtaatggcaaaagtagctgcaattcaacagaaactac aacagcaagatcctgatcagcaacagccatctgaaaatcaagaagagcagcagcaatggaatcagccaagtgagacacaa gaagagaaaagtgcacctcaacctccagtatttgagcagaaaccagacatgggaagcatgcccccaatgagaggaggctt tggtggaagaccacctagacctccaattggtggaagaggtggtccaggtccaggacagcgcccaccatttagacccatgg gtccagatcagcaatttagaggtcctccacctggaggccctggtaatcagcctcctccaagatttggtggacctccacca ggtgatccaagatttggtccaagagggcctatgggtccaggtggaccacatggtatgggttcaggtggacctccaggaat gggaccaggagggccaggtatgggtccagggggacccccaggaatgggtcctggtggaccgggtatgggtccaagagggc caagaatgggcccaggcggacctggtatggggccagggggaccacccatgggaatgggtcctggaggacgacctccaatg agaccaaggggtccaaatgatcagggtggaatgggaatgcgaggaggaagacctccatttgggggaagaggaccgcctcc tccatttggaggtaggggaatgccaccaagaggacctaggggacctgtaaagaatatttcaaactcgaataaattaccag attcttggaatgaggactaa |
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Protein
| Protein ID | pfu_aug2.0_563.1_10930.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10930.t1 MNPYQAGLVPMMMPQPYMVAVRLPPGMAAPQRAGQSAALLPGMPLTAAAAAGASRFPTPPPGAVQASALQAAALTGIPTT LSTAAPLTQPPGFCFVWAGARATHGVKAGKVYYEVQIVEHLPTDFGDDHQEKDPHILRVGWSIDDSSFQLGEEPFSYGYG GTARFSQNNRFTQYGEKFGHGDIIGALLDLDSKPPTISYTKNGTWLGIAHSLHGFPVGEKALFPHILTKNIRFKANFGQE GQWYPPPPGYNYLAHSPEKIPGRQPPAKKSDCEMIMIIGLPGAGKTTFGMKMQKDYPEKRYNIIGTDTLIDKMKVMGLPR KNNYHGRWDVLIDKATKCLNKLFEIAKSKHRNYILDQTNVYPSARRRKMKNFQGFYRRACILQPDDSELQRRSEKRTVED GKYVPESAVIEMKANFKLPEDNDPLFDSIEYVELGKRDVQVLLDRYNVEGRQNQAPGQGRFGQHGKSGGPFQPPADLRQG AYSNQSSNALSQYGYGGQPQSYGQQQGYGGQRDDQRYDSGRHPAPAGQHDSEPLEKRARLDLSGNSSALDLLKQEYAEEE QPQAALASLVQPQLQQQAVKVEPGFAGMQHFGQQIILDPQRALVGHSLYGQAIQAQMTAYGNATQAGLSAAAFGQGVLAQ SAQGLSAQSLAAQGLTAQGLTAQGLGASALIGQPPPPPADLYGDVKALRGHALGTTLVKQEIGNLQYAFQGSTVEDKKWQ EQQPQPTEQYGGQRRSGESDRGNSKESSFQDNQNRNRSHGYDSYNERSERQNSYGQSRDSNYGRRQDQSRGYRDQGNDRR GQDYDKREQGRDGRGHSRGDSRGDSRGNDRGYQDRRDQGRDRSHNDSRSSSQSYRGGRFDGGGGSQSQSAQDFEGPPSRG SQGSDSGDKPKRERRRPSKWDTPDESNSPTQAAAESGVSQEVMAKVAAIQQKLQQQDPDQQQPSENQEEQQQWNQPSETQ EEKSAPQPPVFEQKPDMGSMPPMRGGFGGRPPRPPIGGRGGPGPGQRPPFRPMGPDQQFRGPPPGGPGNQPPPRFGGPPP GDPRFGPRGPMGPGGPHGMGSGGPPGMGPGGPGMGPGGPPGMGPGGPGMGPRGPRMGPGGPGMGPGGPPMGMGPGGRPPM RPRGPNDQGGMGMRGGRPPFGGRGPPPPFGGRGMPPRGPRGPVKNISNSNKLPDSWNED |
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