Gene
| Gene Model ID | pfu_aug2.0_563.1_10931 |
|---|---|
| Locus | scaffold563.1 : 124955 ... 139845 : - |
| To GenomeBrowser | scaffold563.1:124955..139845 |
| Genes list of scaffold | scaffold563.1 |
| Synonym | pfu_aug1.0_4674.1_67035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_563.1_10931.t1 | 2 | 1 | MAM | 68 | 152 | 9.9e-35 | 119.6 | 1.1e-21 | 1.6e-17 | 63.7 |
| pfu_aug2.0_563.1_10931.t1 | 2 | 2 | MAM | 157 | 232 | 9.9e-35 | 119.6 | 1.1e-18 | 1.6e-14 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_563.1_10931.t1 | gi|583983550|ref|XP_006787061.1| | PREDICTED: IgGFc-binding protein-like [Neolamprologus brichardi] | 3.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_563.1_10931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10931.t1 atgacggcgggactcgttgacaggttcgactcgtttgcagagcaattcgctcctgcaattttgatgcaagtttttgtggt tggacgcaggggacagttgacgaatctgattggctctttcactccaacaatagtggacaaaggcttcctaacagtcgtct atcatcaacaaccaaggagaattacactgtttgacaaggcaggaccagtggtctgcgcggaattccactaccggatgtac ggtcaagatattggaagtctacacatgaaccttctttcaaatgtgtcgtcatatccactttggtcaacaaacagagatac cggtttaagatggacgaaagcagccgtagaaattattcatccaaaagcattccagattgagtttaaaggagtaagaggat acggtttttatggagagatcgccattaatgacgtcactataaagtctggaaaatgcatagctgcacctcaaagacagggg gacagggcccgtttagtttctcctgtcatcgtcatcagcggagagggatgtctaaaattgtggtaccatatgtacggcgg ccatgtggcacatcttagggtgttcctaaaatttccaaacggccgtactgaatatgtctggaagatgtatggcaaccgag gaaagcaatggagatttgctcgaattccaataagacagaatcattctttcagagttaagcggtggtcgcaacccgccgaa cgtgcaagtacgtgttgtctacgtgcaaaaacgtatacaaactttgtggatccgcaaggtgtccgtgcgttatcagtacg tcgtccgtacggatttggaaacacgtag |
|
Protein
| Protein ID | pfu_aug2.0_563.1_10931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10931.t1 MTAGLVDRFDSFAEQFAPAILMQVFVVGRRGQLTNLIGSFTPTIVDKGFLTVVYHQQPRRITLFDKAGPVVCAEFHYRMY GQDIGSLHMNLLSNVSSYPLWSTNRDTGLRWTKAAVEIIHPKAFQIEFKGVRGYGFYGEIAINDVTIKSGKCIAAPQRQG DRARLVSPVIVISGEGCLKLWYHMYGGHVAHLRVFLKFPNGRTEYVWKMYGNRGKQWRFARIPIRQNHSFRVKRWSQPAE RASTCCLRAKTYTNFVDPQGVRALSVRRPYGFGNT |
|