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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_563.1_10933
Locus scaffold563.1 : 163214 ... 164095 : -
To GenomeBrowser scaffold563.1:163214..164095
Genes list of scaffold scaffold563.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_563.1_10933.t1 1 1 C1q 55 183 6.3e-11 42.3 2.1e-14 1.0e-10 41.6

Transcript
Transcript IDpfu_aug2.0_563.1_10933.t1
Definition-
>pfu_aug2.0_563.1_10933.t1
atggcaatagccgatggtgtactgttcaacagtaacgttagtttgaatccaagaacggattctctggagcatctacgtca
ggacgttatatcattgttagcacaacagaatgacagaatacagaaattggagcgagaagttctaagtaaaggaaatcacg
ttgccttcatggcagagttagaccagagcgtgtcagcaaccggcgttgggtacatcggctttaataatatcatcaccaac
gtaggccaagcctatcacacaccacagttaacggttccagcaaatggcactcactacctacacttccagactgtttatat
cccgggtccatcaaagtccagtctgaacgtacatcttgtgagaaatgatatcaaaatacaaggcacgctggaaagtcggt
ctgtaaatggtaattccacaatggtcattctgagtggctctatgctcctgaatctagcggtcaatgatgtcctgagagtg
gacataacggaaaacaacggtgtcaattatattgttggtggagatctcaatactcattttatgggatttcatataaactg
a

Protein
Protein IDpfu_aug2.0_563.1_10933.t1
Definition-
>pfu_aug2.0_563.1_10933.t1
MAIADGVLFNSNVSLNPRTDSLEHLRQDVISLLAQQNDRIQKLEREVLSKGNHVAFMAELDQSVSATGVGYIGFNNIITN
VGQAYHTPQLTVPANGTHYLHFQTVYIPGPSKSSLNVHLVRNDIKIQGTLESRSVNGNSTMVILSGSMLLNLAVNDVLRV
DITENNGVNYIVGGDLNTHFMGFHIN

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