Gene
| Gene Model ID | pfu_aug2.0_563.1_10934 |
|---|---|
| Locus | scaffold563.1 : 175656 ... 187752 : - |
| To GenomeBrowser | scaffold563.1:175656..187752 |
| Genes list of scaffold | scaffold563.1 |
| Synonym | pfu_aug1.0_4674.1_67033 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 3 subunit d-like isoform x1 | GO:0001731 GO:0003743 GO:0005852 GO:0006446 GO:0016282 GO:0033290 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_563.1_10934.t1 | 1 | 1 | eIF-3_zeta | 4 | 524 | 0.0 | 705.7 | 0.0 | 0.0 | 705.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_563.1_10934.t1 | gi|524871130|ref|XP_005092341.1| | PREDICTED: eukaryotic translation initiation factor 3 subunit D-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_563.1_10934.t1 | gi|676474891|ref|XP_009060291.1| | hypothetical protein LOTGIDRAFT_177433 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_563.1_10934.t1 | gi|675869576|ref|XP_009020348.1| | hypothetical protein HELRODRAFT_185703 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_563.1_10934.t1 | gi|585707504|ref|XP_006823996.1| | PREDICTED: eukaryotic translation initiation factor 3 subunit D isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_563.1_10934.t1 | gi|291241627|ref|XP_002740709.1| | PREDICTED: eukaryotic translation initiation factor 3 subunit D isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_563.1_10934.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10934.t1 atggcacattttattcctcctcaaattcaagacaatccccatggatggggtccttgtgcaatccctgaccaattcaaaga tctgccctaccaacctttcgcaaagggagatcgattaggaaaggtctctgactggacaggtgcaacttatcaagacaaaa gatatctagggaagtattcctcagcattcggtggaggcggtagtcagtatgcttactaccatgaagaagatgaaaatagc ttccagcttgtcgacacatcaaagatacagaaaccccagtatcagcgggggcgtagggtattccaacagaataaacagag acgggagcgagagaggagacagcaacaagctgcggccaacatgcagatacagtcaaagatgcagaagagtagagaaaggg atcgccagaggttactaaggaagtggcagaaacagtttggacggcaaatgcaagaaaatcgtcaaaaggctccgttgaag cacagagatgcctctgttcaagtgaaggacaactgggatgtggtagaggagatggacttcccacgacttgctaagctcag tctgcccagtattgacgatggagaggatctaatgacttgtggtgagatggagtattatgataagacttatgacagagtaa caaccaagaacgaaaaacgactcaagagaattgacagaatattccataaagtcacaactacagatgaccccattatcaga cagttggctaaatcctctgggaatgtatttgccactgatgctatccttgcaactctgatgtgctgtacgaggtctgtcta ctcatgggatattatagtccagcgcgtcggcaataagctattttttgacaagcgtgatgactccgagtttgatctgctgt ccgtgagtgaaacagccaccgagccacctcaggacgagggcaacagcatcaactctccacgtaacctggctctggaagca accttcatcaaccataatttctctcaacaagtactaaaaatgggagaggagaagtacaagtttgataaaaacaatccatt cgtacagaatgatgagatgtctaatgtagcatcagtgggatacaggtataggaagttttctcttggaaacgacatagagc ttataacaaggacagagcatgatgctgtattaattggtcctaactccgagcttcaatatatgaacatcaaaacattaaat gagtgggattctaggtttagtggaggagtggattggagaagtaggctagatacacagagaggtgctgtgttagcgacaga actaaaaaataacagctgtaaattagctaaatggaccgtgtgttctctactggcaggatctgaccaaatcaaatttggct atgtatctcgtgttcactatcgggacacatcaaagcatgtgatacttggtacacagcagttcaagcctaacgagtttgcc agtcagataaatctaaatatggaaaatgcctggggaatactcaggtgtattatagatacctgtatgaaactgaaggaggg aaaatacctcatcatgaaagaccccaacaagcctgttatgaggatttatgatatacctgatgacacattcgaatctgatg aagacgaagatgatgatgatgacgatgacgatgatgacgatgatgatgatgaaagcagtgaagaggaaggcaaatag |
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Protein
| Protein ID | pfu_aug2.0_563.1_10934.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10934.t1 MAHFIPPQIQDNPHGWGPCAIPDQFKDLPYQPFAKGDRLGKVSDWTGATYQDKRYLGKYSSAFGGGGSQYAYYHEEDENS FQLVDTSKIQKPQYQRGRRVFQQNKQRRERERRQQQAAANMQIQSKMQKSRERDRQRLLRKWQKQFGRQMQENRQKAPLK HRDASVQVKDNWDVVEEMDFPRLAKLSLPSIDDGEDLMTCGEMEYYDKTYDRVTTKNEKRLKRIDRIFHKVTTTDDPIIR QLAKSSGNVFATDAILATLMCCTRSVYSWDIIVQRVGNKLFFDKRDDSEFDLLSVSETATEPPQDEGNSINSPRNLALEA TFINHNFSQQVLKMGEEKYKFDKNNPFVQNDEMSNVASVGYRYRKFSLGNDIELITRTEHDAVLIGPNSELQYMNIKTLN EWDSRFSGGVDWRSRLDTQRGAVLATELKNNSCKLAKWTVCSLLAGSDQIKFGYVSRVHYRDTSKHVILGTQQFKPNEFA SQINLNMENAWGILRCIIDTCMKLKEGKYLIMKDPNKPVMRIYDIPDDTFESDEDEDDDDDDDDDDDDDDESSEEEGK |
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