Gene
| Gene Model ID | pfu_aug2.0_563.1_10936 |
|---|---|
| Locus | scaffold563.1 : 217003 ... 236265 : + |
| To GenomeBrowser | scaffold563.1:217003..236265 |
| Genes list of scaffold | scaffold563.1 |
| Synonym | pfu_aug1.0_46536.1_34381 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein transport protein sec31a isoform x1 | GO:0043231 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_563.1_10936.t1 | 2 | 1 | Sec16_C | 14 | 54 | 2.2e-06 | 27.6 | 0.49 | 2400.0 | -2.1 |
| pfu_aug2.0_563.1_10936.t1 | 5 | 1 | WD40 | 81 | 100 | 3.1e-11 | 42.7 | 0.39 | 1900.0 | -1.1 |
| pfu_aug2.0_563.1_10936.t1 | 5 | 2 | WD40 | 120 | 151 | 3.1e-11 | 42.7 | 5.6e-06 | 0.028 | 14.3 |
| pfu_aug2.0_563.1_10936.t1 | 5 | 3 | WD40 | 171 | 196 | 3.1e-11 | 42.7 | 0.053 | 260.0 | 1.7 |
| pfu_aug2.0_563.1_10936.t1 | 5 | 4 | WD40 | 218 | 237 | 3.1e-11 | 42.7 | 0.06 | 300.0 | 1.5 |
| pfu_aug2.0_563.1_10936.t1 | 5 | 5 | WD40 | 251 | 288 | 3.1e-11 | 42.7 | 1.9e-09 | 9.3e-06 | 25.3 |
| pfu_aug2.0_563.1_10936.t1 | 2 | 2 | Sec16_C | 481 | 682 | 2.2e-06 | 27.6 | 3.3e-08 | 0.00016 | 21.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_563.1_10936.t1 | gi|524877064|ref|XP_005095239.1| | PREDICTED: protein transport protein Sec31A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_563.1_10936.t1 | gi|676474257|ref|XP_009060088.1| | hypothetical protein LOTGIDRAFT_106381 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_563.1_10936.t1 | gi|678011496|ref|XP_009081250.1| | PREDICTED: protein transport protein Sec31A isoform X1 [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_563.1_10936.t1 | gi|554525199|ref|XP_005857460.1| | PREDICTED: protein transport protein Sec31A isoform X9 [Myotis brandtii] | 0.0 |
| pfu_aug2.0_563.1_10936.t1 | gi|558106220|ref|XP_006084614.1| | PREDICTED: protein transport protein Sec31A isoform X12 [Myotis lucifugus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_563.1_10936.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10936.t1 atgaaggtcaaggagatagagcggacggctaacatagcatggtcgccatcagatcagtttcccatatacatggtggctgg tacagctgcacaacaactagatgccacattcagcacatcagcagcattggaagtgtatgagctgaatttgacagactcat cattatccatgccagtggtagctacagtaccagcagactgcaggtttcacaagatagtatggggttctcatgggatgaca gactccagtgccgtgtcaggtatcgtggtggcaggggcagataatggtagtatttactgttacgatggagctggtctcat caaaggctcgtctagtagtttacgatttaaaaaggagaaacacactggtgctgtcaaagctctggattttaataaatttc agaagaacttattggcatcgggagcttcagaatcagagatttacatctgggatatgaataagcctgaatcgccgatgacg ccaggagccaaatctcagccaccagaggaagtggcgtgtatagcatggaattgtcaagtacagcatatcattgcctccac tttcacctctaaatgtgtcgtatgggacctgcgtaagaacgaaccaatcatcaaagtcagcgatagcatgtccaggatta agtgtaagatggtctcatggcaccctgacgtagccacacagatgtgcttgtcctctgaggacgaccacacccctgttata cagctctgggatctcagatatgccacatcacctgtcaaggtccttgaaaatcatcaaagaggtgtattggacatagcatg gtgtccccaggatccagatcttctccttagctgtggtaaagataacagaatattatgttggaaccccaatagtaatgtac aaggtggagaggtggtgtatgaacttngcaaccagaattattggaatataattctatttggtggtaagatggtgagcttt gatcacgagaaatctgtcaacccacaacaaccaagcccaagacaagtatacatcagtcaagtagtcacagaaactgaatt acttcaacgttcatctcaactagaacaggctctttataacggacagtatgtggaatattgtgcaatgaaagctgctaact ctacagacccattacaggaaaacatctggaatttccttagggtgaatttcgaaaaggagccaagggatcattacatccag cttctaggctacgataaaacagaattagtaaagaagggaggccttacagccccgtcagcaggatctggacaagcatcacc aagtgttggctccaagactcctggtagcagagatgagatttctttgggctcctcggcatttgatgagatagcagcctcct cactcaaacaacaggaggaagatgaagctcctcccactcctctagtcataccaactaaaagtgatgctgacggtctattg agccaggcattactaacagggaactttgaggcggctgtggacatatgtctgtgtgagaatatgatggcagaggccattct cctctctatagctgggggtcctgaactactcagcaggacacagaaaaaatacttccagatcaacaagagtcacgtaggaa ggctgatatcatcagttgtgacacatgaatggtcacacattgtagaaacctgtgagttagccaattggaaggaagctttg gcagtaatacttacctacgcttcaccagacgagtttgcttcattatgtgatactcttgcacttcgactagaatctgaagg agaattttctgtttacgccagcttatgttacatatgctctggcaatgtagaaaagttggtggaaaattggcacaaaaaca cagagagcggaaattcccctctggccttacaggatctggtagaaaaagtgatggtactgagacaagcagtagagttatct agggggcgttctatggatgttggaagtggtcatctagcagagaaactcaacaattatgctaatatgttggctgcccaagg cagtttagatacagctattaggtacttaggaaattcaacagagattagtcttgcagttttaaaagacagattgtatcatg ctctcggcaatgttcagggactacaggctccacagagtccatttcaaaaacagaatgttttacctcaaggggcacggcag ccgcaacaaaaacagcaacaaccacagcaaccacgcagtgctgtacgacaacctggtcagtcagtatcagcacaccaagc cacggcacaaggctcgtttggtaccgtaaccacaccgtcagtgtcttacatgaactccactaactactcagtgccatatt cacaaatgaacggttctacggccctaccatcgcaagctcatactggtcaacataatctttacaacccagcactatcagcc cctgctgtatcagccagtactagcatgccaggagctgtctcaaaaggtcctttatcacacaaatacccatcacatcctgc tacacaaccttcatatggtatggattcctatggccacagcaatgttcaatctccatacggctcaaaccagccgggatatg accaaacacagaattattatggagttgttggtgcatcatcacaagttagccatgagaacatatacaacccaggaacacca ggtggtcccagtcaaccatcaagaggaagtggtttaccacacatggaatcattcatggaccataagcctaacaccggatg gaatgacccaccaatggttaaagacagaaaaccaaagaccccaacaactcagtatgaatcatcctctaatacaaacccca tgtttggtgcctctgttcccagccaggacccaccaggagcacccatgaattacgcaggtttatataacccacaggagcat catgctgcaatacagcctgctaggaaattccccgaccctgcaccctctttcaacacatctgccccccagaagcaggcaga ggtagcggcctccagacctgaacctcccaaaccagtagaaaaaggacctatacctcaggaacaccaggtcctacaggata tatttggtagcctcgtcaagaactgtacctctgtagctagcaatgcacaaatgaaaagaaaacttgatgaagtatcgaga aagctggagcttctgtatgacagattaaggcaaaataatctgtcacagtctgtaatactaggattacatcagatagtccn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggccatacagcagtatgatt ataatacaggacttcatatatacacacagatggttagccaaggaaacttctcagaaatcagcggctttatgcccggactt aaaatgctcatacaaactgccatgcagatga |
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Protein
| Protein ID | pfu_aug2.0_563.1_10936.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10936.t1 MKVKEIERTANIAWSPSDQFPIYMVAGTAAQQLDATFSTSAALEVYELNLTDSSLSMPVVATVPADCRFHKIVWGSHGMT DSSAVSGIVVAGADNGSIYCYDGAGLIKGSSSSLRFKKEKHTGAVKALDFNKFQKNLLASGASESEIYIWDMNKPESPMT PGAKSQPPEEVACIAWNCQVQHIIASTFTSKCVVWDLRKNEPIIKVSDSMSRIKCKMVSWHPDVATQMCLSSEDDHTPVI QLWDLRYATSPVKVLENHQRGVLDIAWCPQDPDLLLSCGKDNRILCWNPNSNVQGGEVVYELXNQNYWNIILFGGKMVSF DHEKSVNPQQPSPRQVYISQVVTETELLQRSSQLEQALYNGQYVEYCAMKAANSTDPLQENIWNFLRVNFEKEPRDHYIQ LLGYDKTELVKKGGLTAPSAGSGQASPSVGSKTPGSRDEISLGSSAFDEIAASSLKQQEEDEAPPTPLVIPTKSDADGLL SQALLTGNFEAAVDICLCENMMAEAILLSIAGGPELLSRTQKKYFQINKSHVGRLISSVVTHEWSHIVETCELANWKEAL AVILTYASPDEFASLCDTLALRLESEGEFSVYASLCYICSGNVEKLVENWHKNTESGNSPLALQDLVEKVMVLRQAVELS RGRSMDVGSGHLAEKLNNYANMLAAQGSLDTAIRYLGNSTEISLAVLKDRLYHALGNVQGLQAPQSPFQKQNVLPQGARQ PQQKQQQPQQPRSAVRQPGQSVSAHQATAQGSFGTVTTPSVSYMNSTNYSVPYSQMNGSTALPSQAHTGQHNLYNPALSA PAVSASTSMPGAVSKGPLSHKYPSHPATQPSYGMDSYGHSNVQSPYGSNQPGYDQTQNYYGVVGASSQVSHENIYNPGTP GGPSQPSRGSGLPHMESFMDHKPNTGWNDPPMVKDRKPKTPTTQYESSSNTNPMFGASVPSQDPPGAPMNYAGLYNPQEH HAAIQPARKFPDPAPSFNTSAPQKQAEVAASRPEPPKPVEKGPIPQEHQVLQDIFGSLVKNCTSVASNAQMKRKLDEVSR KLELLYDRLRQNNLSQSVILGLHQIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPYSSMI IIQDFIYTHRWLAKETSQKSAALCPDLKCSYKLPCR |
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