Gene
| Gene Model ID | pfu_aug2.0_563.1_10938 |
|---|---|
| Locus | scaffold563.1 : 254403 ... 265278 : + |
| To GenomeBrowser | scaffold563.1:254403..265278 |
| Genes list of scaffold | scaffold563.1 |
| Synonym | pfu_aug1.0_1907.1_22790 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| high-affinity choline transporter 1-like isoform x1 | GO:0005215 GO:0016021 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_563.1_10938.t1 | 1 | 1 | SSF | 57 | 436 | 1.9e-37 | 128.9 | 3.09995e-41 | 2.3e-37 | 128.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_563.1_10938.t1 | gi|260816898|ref|XP_002603324.1| | hypothetical protein BRAFLDRAFT_208041 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_563.1_10938.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10938.t1 atggagaaagttgatttaaaaaaggcattgaagcggaggttaaggacacaccaacagcatcccattcagagttgtatatt taactgggacaaagtacccgcgggcatcacctctctatcggtcgacattctcaatgtgttcgcactcatacaaatacctg acattatatcgacatgggttggaggtggattcataaacgggacaacagaagtgatatacacaagtggtttagtgtggtgc caggctcctgttggatactcactcagtcttgttcttggaggagctttctttgccgatagaatgagatcaaagcgatacac tacagttcttgaccccttctctgagcgatatggagagagaatgggaggtttactatacataccagctcttatgggagacg tattctggtcgggtgccatcttggctgcattaggtgcgactctggcggtgataatagaccttgaccagaatacggctgta attgtatctgcctgtatagccacattgtataccttgtttgggggactttattccgtggcttacactgatgtcatacaatt gatatgcatctttattggtctgtggttatcggtaccatttatactgaccaatgaacatgtaggaaacataaatgatatgg cagaatcgatttcccctaacacgacaactgattggataatggctttagatcaccagcaagtaggatactacatcgattcg gggctacttttgatgtttggaggtattccatggcaggtgtactttcaaagggtcctctcggcaaccagtgcaaagaatgc gcaaattctctcttatactgccggaatcggctgtattgtgatgtccattccttctgtgctgattggtgcggctgctgtaa atgcagactggaatgccactgcatatggtaaggatcaaatcaaggagacagcctatgtattaccacttgccttacagtac ctgacaccagcctgggtatctttcttcggtctcggtgctgtgtctgctgcagtcatgtcgtctgccgattccgcaatttt gtcttcgagtgctatgttttcccgcaatatatacaaaatgatcttccgacaaaaggcctccgaaagagagatagtatggg tgatgcgtgtagctatatttggcgtggctgcccttgctaccatcattgctctgactgtggactctgtatattacctgttt gtgctgtgttcggatctactatatgtcgttacctttccacagctgttggctgtcgtttatcttccctttgctaacaccta tggttccttgatgggattcattttaggccttttcttcagaaaaacaactacaactaccatgacaaggcgtcagaatgaat ag |
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Protein
| Protein ID | pfu_aug2.0_563.1_10938.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_563.1_10938.t1 MEKVDLKKALKRRLRTHQQHPIQSCIFNWDKVPAGITSLSVDILNVFALIQIPDIISTWVGGGFINGTTEVIYTSGLVWC QAPVGYSLSLVLGGAFFADRMRSKRYTTVLDPFSERYGERMGGLLYIPALMGDVFWSGAILAALGATLAVIIDLDQNTAV IVSACIATLYTLFGGLYSVAYTDVIQLICIFIGLWLSVPFILTNEHVGNINDMAESISPNTTTDWIMALDHQQVGYYIDS GLLLMFGGIPWQVYFQRVLSATSAKNAQILSYTAGIGCIVMSIPSVLIGAAAVNADWNATAYGKDQIKETAYVLPLALQY LTPAWVSFFGLGAVSAAVMSSADSAILSSSAMFSRNIYKMIFRQKASEREIVWVMRVAIFGVAALATIIALTVDSVYYLF VLCSDLLYVVTFPQLLAVVYLPFANTYGSLMGFILGLFFRKTTTTTMTRRQNE |
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