Gene
| Gene Model ID | pfu_aug2.0_565.1_17575 |
|---|---|
| Locus | scaffold565.1 : 22525 ... 37595 : - |
| To GenomeBrowser | scaffold565.1:22525..37595 |
| Genes list of scaffold | scaffold565.1 |
| Synonym | pfu_aug1.0_5812.1_09220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_565.1_17575.t1 | 2 | 1 | Sas10 | 207 | 216 | 9.8e-27 | 92.9 | 5.0 | 15000.0 | -5.5 |
| pfu_aug2.0_565.1_17575.t1 | 3 | 1 | Sas10_Utp3 | 211 | 226 | 3.0e-24 | 84.9 | 0.62 | 1800.0 | -0.9 |
| pfu_aug2.0_565.1_17575.t1 | 3 | 2 | Sas10_Utp3 | 242 | 319 | 3.0e-24 | 84.9 | 1.0e-15 | 3.1e-12 | 46.5 |
| pfu_aug2.0_565.1_17575.t1 | 3 | 3 | Sas10_Utp3 | 328 | 390 | 3.0e-24 | 84.9 | 4.6e-15 | 1.4e-11 | 44.4 |
| pfu_aug2.0_565.1_17575.t1 | 2 | 2 | Sas10 | 489 | 563 | 9.8e-27 | 92.9 | 3.3e-30 | 9.8e-27 | 92.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_565.1_17575.t1 | gi|676477669|ref|XP_009061179.1| | hypothetical protein LOTGIDRAFT_126686, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_565.1_17575.t1 | gi|363733428|ref|XP_420598.3| | PREDICTED: something about silencing protein 10 [Gallus gallus] | 0.0 |
| pfu_aug2.0_565.1_17575.t1 | gi|241681355|ref|XP_002411584.1| | Disrupter of silencing SAS10, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_565.1_17575.t1 | gi|573908477|ref|XP_006641957.1| | PREDICTED: something about silencing protein 10-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_565.1_17575.t1 | gi|597743713|ref|XP_007233927.1| | PREDICTED: something about silencing protein 10-like [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_565.1_17575.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17575.t1 atgatcgggatcaccatcatactaaaattaaaagtgaaagtacaacttaccatgccgaaaaagggcaaaggaaagaagaa ggaggtgtcagtgcctgtgtatgattctgatgatgagagacggtacagtagagaggcagtgcccgatcctaacgatgaca gttattaccatgatgaggtggatcaatatcatgctcagaaggataagcttttactggagaaggggatgagatatgaagag gaaggacaatcagagagtgaggaggacgtacttgggcttggagtggaggatgatgatctactcagtgatgaagacataca gaactacaccaaacaactccgcaggatcaaacagatgaaacgtaaagatgagctcggcagtgacatagaggagggggacg agaaagatgctacagacagagtggcctggggtaacaggaggtccaagttttatggcggagatatcagtgatgatgatcta gatctaagtgggtcagagaatgaggaaagtgcagctgtacttgaagaaaaggaagctcttacactgcagaaaaagatggc tgcagaactagatgatttggactttgggttggatatctttaaaaaagagaagaaaacaaaggataaagataaaacagaga caaagatagagaaagatctgtcaaaactatcaaagaaagaaaaactccagttactgaagaaggaatcaccagagatgtta ccacttatagaagactttcagacaaagttaaaagaagccatggatgtgtttctgcctctcggtaagctggtaaaggaagg gaagatacagggtaaagctgccgagtatgtggagagtaaactacaactggcactaaactactgcaccaacataagtttct atatgatgttaaagtccaaacagattccagttcataaccatccagtcattaagaggctagtacagtataggaatttaaaa gaagccatggatgtatttctgcctctcggtaagctggtaaaggaagggaagatacagggtaaagctgccgagtatgtgga gagtaaactacaactggcactaaactactgcaccaacataagtttctatatgatgttaaaatccaaacagattccagttc ataaccatccagtcattaagaggctagtacagtataggaatttaatgaagcagcttgagccggtggacctgaagcttaaa gatgaaatagatgatatcatgaagagattaaagaatggtgaagatgtcagttttggtgaacctgaacctaaaacttttaa gaaaaagaagggagaggaaggtcagtatgagactaaagatgaaaaggcggcattagagtattatcagatgatgaaggcgg gcaggaaaccttcacaggataatgatgaagaggaacgaagtgatgaagaaaatgatgatgtaccagaggatgtaaataat gaagaagagttagatgatgaggaagatgatgaaggaaaacgcgccatcacttaccagattcagaaaaataaaggtttaac agccagtaagaagaaggaactgcgcaatccgagggttaaacatagaatgaaatacagaaaggccaaaatacgtagacgtg gccaggtgagggaggctagaactgaggtaacgagatacggcggtgaggtgtcaggtatcagggctggaatgaagaggagc atcaagatgaaggcttag |
|
Protein
| Protein ID | pfu_aug2.0_565.1_17575.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17575.t1 MIGITIILKLKVKVQLTMPKKGKGKKKEVSVPVYDSDDERRYSREAVPDPNDDSYYHDEVDQYHAQKDKLLLEKGMRYEE EGQSESEEDVLGLGVEDDDLLSDEDIQNYTKQLRRIKQMKRKDELGSDIEEGDEKDATDRVAWGNRRSKFYGGDISDDDL DLSGSENEESAAVLEEKEALTLQKKMAAELDDLDFGLDIFKKEKKTKDKDKTETKIEKDLSKLSKKEKLQLLKKESPEML PLIEDFQTKLKEAMDVFLPLGKLVKEGKIQGKAAEYVESKLQLALNYCTNISFYMMLKSKQIPVHNHPVIKRLVQYRNLK EAMDVFLPLGKLVKEGKIQGKAAEYVESKLQLALNYCTNISFYMMLKSKQIPVHNHPVIKRLVQYRNLMKQLEPVDLKLK DEIDDIMKRLKNGEDVSFGEPEPKTFKKKKGEEGQYETKDEKAALEYYQMMKAGRKPSQDNDEEERSDEENDDVPEDVNN EEELDDEEDDEGKRAITYQIQKNKGLTASKKKELRNPRVKHRMKYRKAKIRRRGQVREARTEVTRYGGEVSGIRAGMKRS IKMKA |
|