Gene
| Gene Model ID | pfu_aug2.0_565.1_17577 |
|---|---|
| Locus | scaffold565.1 : 49146 ... 66205 : + |
| To GenomeBrowser | scaffold565.1:49146..66205 |
| Genes list of scaffold | scaffold565.1 |
| Synonym | pfu_aug1.0_122117.1_21096 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_565.1_17577.t1 | 1 | 1 | SPATA6 | 10 | 149 | 0.0 | 169.9 | 0.0 | 0.0 | 169.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_565.1_17577.t1 | gi|573895113|ref|XP_006635305.1| | PREDICTED: spermatogenesis-associated protein 6-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_565.1_17577.t1 | gi|641761046|ref|XP_008166172.1| | PREDICTED: spermatogenesis-associated protein 6 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_565.1_17577.t1 | gi|706146312|ref|XP_010205162.1| | PREDICTED: spermatogenesis-associated protein 6 [Colius striatus] | 0.0 |
| pfu_aug2.0_565.1_17577.t1 | gi|260832215|ref|XP_002611053.1| | hypothetical protein BRAFLDRAFT_205899 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_565.1_17577.t1 | gi|729767097|ref|XP_010580716.1| | PREDICTED: spermatogenesis-associated protein 6 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_565.1_17577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17577.t1 atgccacgtcgggcacttagatgtgttgtggaccttaaaatccgcgcagtgactgctccaggggtgtggctgcccagcag agaggatgtgtacctcagtataagcctgtttggccagtacagaaacacaaacctcattacgtctgtgttccctcttttta tgaaggaagatttcaggtttgaaaagacatattatacagccctagatccctcagaggtgtcagaatacttggaagatgaa ttgataatatttgagctgctgcagctttccccatttggtggagccaaccgtttagcgtcctacagctgtaatgcacgtga tttcctgttcccctacccatccttggctccctgctatgcttctacagccagagaaattctgctggaacgtaccattgact tccctggtatttctcctaagttggagtttgtaacagttacaaacattaaagaatctctctcaccagagctggatgctcta gaagatgaattggaggctgaaaggaggtcaagacgtagatcacgctctcgttcccgatccaggtcacgaatgtccatgag gtcaccgtccccggctttacgcagatcactcacagactcgttcagtcctaaactctccagtgtggaaagtagaccaccat ttgtcgttagacatttggagaacagcctgattggacgaactcccgtaggactggcccctggaaagaagaagtccaagagg aggagccgatcactaacgcgtagaccatccagtgctttgtctgattctggtgattataccagctaccctagtagcttgac tcacaaatatcgcttgcgcaaggactatgcatctggaagtgatgaagatgacaatgaagtagcgtccttgacaaagtcaa tcgacaacctgtccttcagcaggaggccaaggtcagttagtcctcttctgtacagaccaactcttagtgagaggtaccga cctctgaccccatcagagaaacttgaccttgatctgagagtggagagagctatccaacgtagcaaatcccgtgaaagact ggcccagctggatctagaggaatccctaagacgagcccgtttgaacaggacgttggatgagttagaccttgacacgaggt tgagtaggattaggaggggagagaatgctagtgtacatctaaataatggaaaatattggtccgacagagctgctgaattc caagctaaatcccatcgtcaagtgtttaatgatagtcttagtcagatttactcacggatgtacacgtcagccaagtccaa gtataatatgtga |
|
Protein
| Protein ID | pfu_aug2.0_565.1_17577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17577.t1 MPRRALRCVVDLKIRAVTAPGVWLPSREDVYLSISLFGQYRNTNLITSVFPLFMKEDFRFEKTYYTALDPSEVSEYLEDE LIIFELLQLSPFGGANRLASYSCNARDFLFPYPSLAPCYASTAREILLERTIDFPGISPKLEFVTVTNIKESLSPELDAL EDELEAERRSRRRSRSRSRSRSRMSMRSPSPALRRSLTDSFSPKLSSVESRPPFVVRHLENSLIGRTPVGLAPGKKKSKR RSRSLTRRPSSALSDSGDYTSYPSSLTHKYRLRKDYASGSDEDDNEVASLTKSIDNLSFSRRPRSVSPLLYRPTLSERYR PLTPSEKLDLDLRVERAIQRSKSRERLAQLDLEESLRRARLNRTLDELDLDTRLSRIRRGENASVHLNNGKYWSDRAAEF QAKSHRQVFNDSLSQIYSRMYTSAKSKYNM |
|