Gene
| Gene Model ID | pfu_aug2.0_565.1_17581 |
|---|---|
| Locus | scaffold565.1 : 159456 ... 162528 : + |
| To GenomeBrowser | scaffold565.1:159456..162528 |
| Genes list of scaffold | scaffold565.1 |
| Synonym | pfu_aug1.0_10038.1_53467 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_565.1_17581.t1 | 1 | 1 | NDUF_B7 | 35 | 94 | 3.3e-19 | 68.0 | 6.0e-23 | 4.5e-19 | 67.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_565.1_17581.t1 | gi|597752604|ref|XP_007238155.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Astyanax mexicanus] | 7.0e-22 |
| pfu_aug2.0_565.1_17581.t1 | gi|752863843|ref|XP_011268294.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Camponotus floridanus] | 2.0e-21 |
| pfu_aug2.0_565.1_17581.t1 | gi|665811445|ref|XP_008554187.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Microplitis demolitor] | 8.0e-20 |
| pfu_aug2.0_565.1_17581.t1 | gi|755976063|ref|XP_011307829.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Fopius arisanus] | 5.0e-19 |
| pfu_aug2.0_565.1_17581.t1 | gi|213512214|ref|NP_001134407.1| | NADH dehydrogenase 1 beta subcomplex subunit 7 [Salmo salar] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_565.1_17581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17581.t1 atgcatccagaggctcgtgtagatgatttcagtccagaaaaattcgatcctaacttgggtttcaaaggagaaaggaaaat gcgagagccccccgttagtgctgacattctgaacaacactcagataccctacagatacagagactattgtgtaggccact acatagagatgaagaagtgtttggcagataacataccatttatcaatcgttgtagtgacctacgacatgaatattcattg tgtcaatacgaagatcaggtaaaaaggatgaaagaatacgaaagagaaaagaggatacttctcaggaacagtagaaaaga gacaccagtaaatgaagacttaagtgatatggaatga |
|
Protein
| Protein ID | pfu_aug2.0_565.1_17581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17581.t1 MHPEARVDDFSPEKFDPNLGFKGERKMREPPVSADILNNTQIPYRYRDYCVGHYIEMKKCLADNIPFINRCSDLRHEYSL CQYEDQVKRMKEYEREKRILLRNSRKETPVNEDLSDME |
|