Gene
| Gene Model ID | pfu_aug2.0_565.1_17583 |
|---|---|
| Locus | scaffold565.1 : 185919 ... 203774 : - |
| To GenomeBrowser | scaffold565.1:185919..203774 |
| Genes list of scaffold | scaffold565.1 |
| Synonym | pfu_aug1.0_10038.1_53469 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fch domain only protein partial | GO:0001786 GO:0005515 GO:0005546 GO:0005886 GO:0005905 GO:0010324 GO:0030136 GO:0048268 GO:0072583 GO:0072659 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_565.1_17583.t1 | 1 | 1 | muHD | 257 | 401 | 3.6e-30 | 104.9 | 1.3e-33 | 6.6e-30 | 104.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_565.1_17583.t1 | gi|676463939|ref|XP_009056762.1| | hypothetical protein LOTGIDRAFT_233068 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_565.1_17583.t1 | gi|524913703|ref|XP_005111676.1| | PREDICTED: FCH domain only protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_565.1_17583.t1 | gi|194375728|dbj|BAG57208.1| | unnamed protein product [Homo sapiens] | 0.0 |
| pfu_aug2.0_565.1_17583.t1 | gi|695146447|ref|XP_009500665.1| | PREDICTED: FCH domain only protein 2-like, partial [Phalacrocorax carbo] | 0.0 |
| pfu_aug2.0_565.1_17583.t1 | gi|723152054|ref|XP_010293543.1| | PREDICTED: FCH domain only protein 2, partial [Phaethon lepturus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_565.1_17583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17583.t1 atgacaagtcagatacccagtctgtggtttcttaaaaataagaagaaaaaagaaaagaagaaaaagaaaaaagaaggaaa ggatgacaaagatgacaagtcagatacccagtctgtggacacacaagaagggcaaactaccccagaggttgatgatgaag gttactctatacgtccagatgatatgagcacaaataacggggataaaaatagctggtactctagtgatagtgaaagtgat tcagatgatgaagctaggcggaaaataaaagtagaaataaaacctttgggtaataatgatataacgcatacaggcacagt tgacgacattaagatttccgttagtcagctccggttatcaccaactgtgataacccagaaaaaaagaagtcaaactccaa tagataaaaagatgatgatgaagaggtcccaatcagaatcagatacactagatgtggcaacacccagtcaggatctgtta aatctggatttctttgcgtcatccagtgcttctactccctcaggtgtgaaacataatctcccctcccccctgtcccctat ggcggacacagctttacacaacagtctttcctctcacagtgctggcactccatttactacacaacacaatagttctgatg tttttaatagcaatggtacttctttaatgtcagacaaaggtagtctgttatctccatctagtcaaatgtcacaaggtcta caggcaccagccctccccagtagacctgctcctccaagacctgccccacaggtgaaaactcagccaggagtagagagtac gccaatgccagttatagcttattggaaatgtgatagttctacaacagattatagactagattataaatataatccaaatt ccttgtcatcgccgtcaactctcaaaaatatagccgtcaaagtcagtgttagtggggatgtcaataacatgcagagcatc ccatcaggaaactggaatgctgaaacgcagaaagcaacgtggaagctgaatgatttatcagagcttagtgaggatggtag tcagggcagtataagagctaagtttgaactgaataacggacctagtaaaccagctacaacgtcactgcacttcatttgtg atggtgcttcactgtcaggggtagactttgaattgatagggagtggatatcggatatcactggcaaagaaacgctttggt gcagaaagttttacaacttaa |
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Protein
| Protein ID | pfu_aug2.0_565.1_17583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17583.t1 MTSQIPSLWFLKNKKKKEKKKKKKEGKDDKDDKSDTQSVDTQEGQTTPEVDDEGYSIRPDDMSTNNGDKNSWYSSDSESD SDDEARRKIKVEIKPLGNNDITHTGTVDDIKISVSQLRLSPTVITQKKRSQTPIDKKMMMKRSQSESDTLDVATPSQDLL NLDFFASSSASTPSGVKHNLPSPLSPMADTALHNSLSSHSAGTPFTTQHNSSDVFNSNGTSLMSDKGSLLSPSSQMSQGL QAPALPSRPAPPRPAPQVKTQPGVESTPMPVIAYWKCDSSTTDYRLDYKYNPNSLSSPSTLKNIAVKVSVSGDVNNMQSI PSGNWNAETQKATWKLNDLSELSEDGSQGSIRAKFELNNGPSKPATTSLHFICDGASLSGVDFELIGSGYRISLAKKRFG AESFTT |
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