Gene
| Gene Model ID | pfu_aug2.0_565.1_17584 |
|---|---|
| Locus | scaffold565.1 : 205511 ... 217294 : - |
| To GenomeBrowser | scaffold565.1:205511..217294 |
| Genes list of scaffold | scaffold565.1 |
| Synonym | pfu_aug1.0_940.1_65701 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_565.1_17584.t1 | 3 | 1 | FCH | 7 | 90 | 5.5e-13 | 48.9 | 3.9e-16 | 8.3e-13 | 48.3 |
| pfu_aug2.0_565.1_17584.t1 | 3 | 2 | FCH | 89 | 113 | 5.5e-13 | 48.9 | 0.98 | 2100.0 | -1.1 |
| pfu_aug2.0_565.1_17584.t1 | 3 | 3 | FCH | 157 | 236 | 5.5e-13 | 48.9 | 0.044 | 92.0 | 3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_565.1_17584.t1 | gi|746854417|ref|XP_011057848.1| | PREDICTED: FCH domain only protein 2 isoform X4 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_565.1_17584.t1 | gi|746854415|ref|XP_011057847.1| | PREDICTED: FCH domain only protein 2 isoform X3 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_565.1_17584.t1 | gi|746854413|ref|XP_011057845.1| | PREDICTED: FCH domain only protein 2 isoform X2 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_565.1_17584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17584.t1 atgaccgatgatattttacagggcgagaagaacaatgggttctttgtgctccagaataatatgaaacagggttcaacttc ggccaaagaatttattgattttcttcgggaaagctgtactgtagaagagtcttacagtaaattgttgaacaagttagcca aaacttcagctaatagtgcacatgtagggacctttcagccattttggaatgtgattaaagtgttgatggagaaattgtcc accctccattctcagcttgtacattcactgaacgacatcatcaaggatgtactacgatataatgatgaacagcataaaaa acacaaagccgtaaaggagaaagagcatgggacacatgaggttgttatggcaattcagcaaactaccaatgccctgcata aggcaaaggttttataccatgccagatttatggaacttgaacgaatgaagcgtgataacgcatcagcaaaagaacaggaa aagcaagaacagaagtgcaagaaggctaacgatgagtacagaggttatgtagaaaagtatgccaatattagaaatgattt tgaaacaaagatgttggattcctgcaaacatttccaagaagttgaggaggaacatatatgtcagatgaaggacttcatag acacgtacgctaaagcttgggagaatcagcatgccctcgttggacaggtgcatcaagaattccgacagagttgtgatgaa ttaacagtacagaaactgttagagacgtttataaattccaagactaccggcacagaaaaaccaggtcccatggagtatgt agaaccggacctgtcgagcctgcctcctccccgtgccatgtcacccgaacctgccgagcacagagatagcatctcagaca agtccaaacaagactctagcgggagccccagtccagtaccctccgatcaacctggccctctgagccgcagtgtcaaacta cgagtctccagaacatgtaaaccaacatacatattgtgtttgccttttagcttgccattgttttgctttgcctggtttgg ttttgtgtag |
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Protein
| Protein ID | pfu_aug2.0_565.1_17584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_565.1_17584.t1 MTDDILQGEKNNGFFVLQNNMKQGSTSAKEFIDFLRESCTVEESYSKLLNKLAKTSANSAHVGTFQPFWNVIKVLMEKLS TLHSQLVHSLNDIIKDVLRYNDEQHKKHKAVKEKEHGTHEVVMAIQQTTNALHKAKVLYHARFMELERMKRDNASAKEQE KQEQKCKKANDEYRGYVEKYANIRNDFETKMLDSCKHFQEVEEEHICQMKDFIDTYAKAWENQHALVGQVHQEFRQSCDE LTVQKLLETFINSKTTGTEKPGPMEYVEPDLSSLPPPRAMSPEPAEHRDSISDKSKQDSSGSPSPVPSDQPGPLSRSVKL RVSRTCKPTYILCLPFSLPLFCFAWFGFV |
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