Gene
| Gene Model ID | pfu_aug2.0_569.1_30926 |
|---|---|
| Locus | scaffold569.1 : 137890 ... 141385 : - |
| To GenomeBrowser | scaffold569.1:137890..141385 |
| Genes list of scaffold | scaffold569.1 |
| Synonym | pfu_aug1.0_576.1_29351 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_569.1_30926.t1 | 1 | 1 | C1q | 147 | 272 | 8.9e-24 | 83.9 | 1.9e-27 | 1.4e-23 | 83.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_569.1_30926.t1 | gi|524876826|ref|XP_005095122.1| | PREDICTED: stress response protein NST1-like [Aplysia californica] | 5.0e-18 |
| pfu_aug2.0_569.1_30926.t1 | gi|699585863|ref|XP_009864592.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 3 [Apaloderma vittatum] | 8.0e-15 |
| pfu_aug2.0_569.1_30926.t1 | gi|699629203|ref|XP_009902369.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 3 isoform X1 [Picoides pubescens] | 8.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_569.1_30926.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_569.1_30926.t1 atgtacttagtctttctttccctttttatttttgttgacatacatgatgctaggagtttgtctgctgacaactcatcgga gacagaaaagctgctcagaaaagtggaggaattgacaaatgtgattggaaaactgaatgcaaccgtcatgcgattgtcct cacaaaagggtaagtgtgaagcgaaacaaagtggtgagtgtgaaacgaaacaaagtggtgagtgtgaagcgaaacaaaga ggtgagtgtgaaacgaaacaaagaggtgagtgtgaagcgaaacaaagtggtgagtgtgaagtgaaacaatgtggtgagtg tgaagtgaaacaaagtggtgagtgtgaaacgaaacaaagtggtgagtgtgaagtgatacaaagaggtgagtgtgaagcga aacaaagagatgtacttgtcaacagcacatacggtttttatgcctatgcaacgcggcaacaatatcttcacagtcaacaa gttatcaaatttgattacgtggagacaaatgttggaaattgctttgacgtcacaacaggaaaatttcgggcacctgtcag agggctatatttcttcggcggaaacataatggcagcacccgggcattacatccatattgaaatggttaaaaatggccgcc gagtagcgagcatttttgccgccaagggagaatatccttatgacgacaacaccggaagtgctgcgattaacctagttttg cagaaaggagaggaagtttggttacgggatcagaatgatccggacggcgaagcagttgtgactgatccttacgccatgtt ctccgggttcttgataaatgaaattgtttga |
|
Protein
| Protein ID | pfu_aug2.0_569.1_30926.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_569.1_30926.t1 MYLVFLSLFIFVDIHDARSLSADNSSETEKLLRKVEELTNVIGKLNATVMRLSSQKGKCEAKQSGECETKQSGECEAKQR GECETKQRGECEAKQSGECEVKQCGECEVKQSGECETKQSGECEVIQRGECEAKQRDVLVNSTYGFYAYATRQQYLHSQQ VIKFDYVETNVGNCFDVTTGKFRAPVRGLYFFGGNIMAAPGHYIHIEMVKNGRRVASIFAAKGEYPYDDNTGSAAINLVL QKGEEVWLRDQNDPDGEAVVTDPYAMFSGFLINEIV |
|