Gene
| Gene Model ID | pfu_aug2.0_569.1_30927 |
|---|---|
| Locus | scaffold569.1 : 152697 ... 198535 : - |
| To GenomeBrowser | scaffold569.1:152697..198535 |
| Genes list of scaffold | scaffold569.1 |
| Synonym | pfu_aug1.0_7400.1_52946 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_569.1_30927.t1 | 2 | 1 | Hormone_recep | 280 | 350 | 8.3e-12 | 44.6 | 4.1e-09 | 2.0e-05 | 23.7 |
| pfu_aug2.0_569.1_30927.t1 | 2 | 2 | Hormone_recep | 587 | 650 | 8.3e-12 | 44.6 | 1.5e-07 | 0.00072 | 18.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_569.1_30927.t1 | gi|676469898|ref|XP_009058681.1| | hypothetical protein LOTGIDRAFT_122846 [Lottia gigantea] | 9.99967e-42 |
| pfu_aug2.0_569.1_30927.t1 | gi|524916664|ref|XP_005113105.1| | PREDICTED: vitamin D3 receptor B-like [Aplysia californica] | 1.99993e-41 |
| pfu_aug2.0_569.1_30927.t1 | gi|676469901|ref|XP_009058682.1| | hypothetical protein LOTGIDRAFT_122759, partial [Lottia gigantea] | 6.0e-27 |
| pfu_aug2.0_569.1_30927.t1 | gi|524900058|ref|XP_005106454.1| | PREDICTED: nuclear hormone receptor HR96-like isoform X2 [Aplysia californica] | 7.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_569.1_30927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_569.1_30927.t1 atggacatggacaccctgtcaagagcagacagtgacgtaaccagtacaggggaacagggcgggtctgatcatgaataccc agaggacctcattgtccgtaaagtatcagcggcagaggacaccctgtcaagagcagacagtgacgtaaccagtacaggga aacagggcgggtctgatcatgaatacccagaggacctcattgtccgtaaagtatcagcggcagaggaggaggaaggcggg agcccagactgttctattatcggtatatcccaggggaagaaggacaagacttgcctagtctgtggagataaggccctagg gaccattcgtgggagatgtgagggaaaatgcgatgtgacaacggaatccaggtcattttgtaagagatgtagacttgcta agtgcttcagtgttggaatgaggaaagatatgattttaaatgaggagcaaaaacaagttcgaaagcagaaaataatcata aacaaactcaggaagcagggtcaacttccgccggaagacacgtacgccgcgtcagaacgtgatctcaatgataccgtaca ggacaatctgaaaagccagtctttccatgaactacgaacaacattcccaaatttgtcggatactgacatccgggcactta tgaatttacagtcaggaaaagacggcaagacttcttccgaaccaaacaaatatcctagttggatcgattctcaggaaata gtggcggatctaatagcagagctcccagaaatagatcagtgtatattgaacgaattgcgcgttgcgcatgagcaaagctc gtttctcggaagcactcagacgtctttgaaacaactgccgacaaatccgacggaattcctaaacgtggctgagggttttg ttagacggataataaaactggctaagaatatagagttttttaaaatggtaattaaagaggaccaaattgcgcttctcaag ggagcagtggtagagatcctgatgctaaggtcggcggtcaactatgacattcatacggagacttggagtttaaacacaat gaaatgtctaacgaaaggggcggcaccactgctgggtactgctccttccacatcagacccaaggagttccctcccttcct ccacaagtacaccggctgaaagtccgacatccaccagtgtcgctaatcctctcatttcatcaaatatttcagccgagcat ttgaagagtatggcaaaagcatcaggtattgatattgaaaaattacgtgcaatagggcaaaaacaaggtgattctgtaac attgaaaaatagtcaagctccgagtcagtcggcaagcgaaacatctccaacaggaaacctggaagcaggcggaactacaa cgaaaacgctacaagatatcgctcaatcgtcaggtcagagtattgatacaatcaaactgagagcaaaagctgtaggtctt gatattgataaattgacctcaaaaaaagacgagatggtacagaaagctaaagaactagcgaaatcttccggacaggatat cgaggcattacgaaatatggcgagagcggccgggtttgacgtcgacaaacttcgtgaaatgtacacaggtgtgagctcca cccctagcgaggacggggggtcgggtgagggaggtggtgaccgaatcaattccagtatactcaaagggaacgcgcagtcc cagacaatgtttcttacctattccaaatttataaaatctttgatgcgaactattcacggcgacctgctgatacttaagct gatgattatgatatcgttattttctgctgaccgacagggaatcaaagagggcgacaaaatccgtgagattcaggaatgct acgccggtatattacagaaatacgttagcctacgcttcaaagaggagaaaaatatgctagccaggattattatgaaactg accgatctgcgcaatatcaacgaggttcatactaaaatgttgctgaaaatgaaactagacaatatagaaccgttgctatt ggagatatttgaccttcaaccttaa |
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Protein
| Protein ID | pfu_aug2.0_569.1_30927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_569.1_30927.t1 MDMDTLSRADSDVTSTGEQGGSDHEYPEDLIVRKVSAAEDTLSRADSDVTSTGKQGGSDHEYPEDLIVRKVSAAEEEEGG SPDCSIIGISQGKKDKTCLVCGDKALGTIRGRCEGKCDVTTESRSFCKRCRLAKCFSVGMRKDMILNEEQKQVRKQKIII NKLRKQGQLPPEDTYAASERDLNDTVQDNLKSQSFHELRTTFPNLSDTDIRALMNLQSGKDGKTSSEPNKYPSWIDSQEI VADLIAELPEIDQCILNELRVAHEQSSFLGSTQTSLKQLPTNPTEFLNVAEGFVRRIIKLAKNIEFFKMVIKEDQIALLK GAVVEILMLRSAVNYDIHTETWSLNTMKCLTKGAAPLLGTAPSTSDPRSSLPSSTSTPAESPTSTSVANPLISSNISAEH LKSMAKASGIDIEKLRAIGQKQGDSVTLKNSQAPSQSASETSPTGNLEAGGTTTKTLQDIAQSSGQSIDTIKLRAKAVGL DIDKLTSKKDEMVQKAKELAKSSGQDIEALRNMARAAGFDVDKLREMYTGVSSTPSEDGGSGEGGGDRINSSILKGNAQS QTMFLTYSKFIKSLMRTIHGDLLILKLMIMISLFSADRQGIKEGDKIREIQECYAGILQKYVSLRFKEEKNMLARIIMKL TDLRNINEVHTKMLLKMKLDNIEPLLLEIFDLQP |
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